Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02893 ATGGGTTCTAATCTTAATACAGAATTATCAAAGAAAACTCCTATTTTTGGTATAAAGGTTTGGGAAATAATTGCAATTGTAGTTGCTTTGTCTATTATAGTTATCCTTTCTGTGTTCTCACTTTGTCTTACTTCAAGAAAGAAATCTAGAAAAGCAAGGGATAAGATTCCTGTTACTGAGATACCAAATGTGTCAAAGGAAATTACGGAAGTGAGGGTTGAACAACTATCATCAACAAATGGATTTGTTCCTAGTGACAGAGAATCAGATAAAGTTATGGTTCATTTAGGTAATGGTGATAGTAGTAGCCATTCAGATTCATTTCATCAATACATGGAGAAAGATGGTGGTTCATATTCACAATCAGGAGAAGAAAGTAGTTGTGGCACAGTTACTGTATATAAGAAGAACTCTTCTTCTTCATACCCTTTAACAGCTCCTTCACCTTTATGTGGTCTTCCTGAATTTTCTCACTTAGGTTGGGGTCATTGGTTTACTTTGAGGGATCTTGAACTTGCTACGAATCGATTTGCCAAAGAAAACGTGCTTGGTGAAGGTGGGTATGGAGTGGTTTATAAGGGACATTTGATCAATGGGAGTCCAGTTGCTGTTAAAAAGATACTCAATAATACTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTTAGACACAAAAACTTGGTTCGCCTTTTGGGATACTGCGTTGAGGGAATTCATAGGATGTTAGTCTACGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGCTATCTTACTTGGGAAGCACGTACCAAGGTTCTCCTAGGCACAGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCGAGCAACATATTAATCGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCAAAATTATTGGGTGCTGGGAAGAGTCATGTCACAACCCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAACACCGGCCTTCTAAACGAGAAGAGCGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACAGGAAGAGATCCAGTTGATTATGGTCGTCCGACAAATGAAGTGAATCTAGTTGACTGGATGAAGATGATGGTTGGAAGCAGAAGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAACCATCAACTAGAGCTTTGAAACGGGCTCTCTTAACCGCTTTAAGATGTGTTGATCCAGATTCTGAGAAAAGGCCCAAGATGAGCCAAGTTGTACGAATGCTGGAGTCCGAGGAATACCCTTTAGCAAGAGAGGACCGAAGGCACAGAAGAAGAAATCAAGGGGGTAGTGCAGAAATTGAATCTCAGAGGGAATTTTCTGACACAGACAAGAGTGAGATTCAGAGTTATAGAGAAGAGATCAGAGGCTTCAGAGATATTTATGGTAGCAATGTCCAAGAATGTCGTACGAGCGTGTGGAAAACTGCAACCATGCCAAATAGACACAACATGTGTGCAAGACATCAAACAATAGGTCCTATCGCCCAATCTCCGATCCGAACTCGGCTTGGTGATGGAACAAAGGTTTTGATCAAATAA 1659 0.4075 MGSNLNTELSKKTPIFGIKVWEIIAIVVALSIIVILSVFSLCLTSRKKSRKARDKIPVTEIPNVSKEITEVRVEQLSSTNGFVPSDRESDKVMVHLGNGDSSSHSDSFHQYMEKDGGSYSQSGEESSCGTVTVYKKNSSSSYPLTAPSPLCGLPEFSHLGWGHWFTLRDLELATNRFAKENVLGEGGYGVVYKGHLINGSPVAVKKILNNTGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARTKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTNEVNLVDWMKMMVGSRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPLAREDRRHRRRNQGGSAEIESQREFSDTDKSEIQSYREEIRGFRDIYGSNVQECRTSVWKTATMPNRHNMCARHQTIGPIAQSPIRTRLGDGTKVLIK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02893 552 Pfam Protein kinase domain 178 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02893 552 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 495 - -
Car03g02893 552 PANTHER OS01G0323000 PROTEIN 3 495 - -
Car03g02893 552 Gene3D Phosphorylase Kinase; domain 1 159 252 - -
Car03g02893 552 SUPERFAMILY Protein kinase-like (PK-like) 161 454 IPR011009 -
Car03g02893 552 CDD STKc_IRAK 183 449 - -
Car03g02893 552 ProSitePatterns Protein kinases ATP-binding region signature. 183 206 IPR017441 GO:0005524
Car03g02893 552 ProSiteProfiles Protein kinase domain profile. 177 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02893 552 MobiDBLite consensus disorder prediction 456 486 - -
Car03g02893 552 SMART serkin_6 177 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02893 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Car03g02893 552 Gene3D Transferase(Phosphotransferase) domain 1 253 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02893 Car-Chr3 74221595 74232787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02893 154 451 Trihelix Transcription Factor Family AT1G70460 49.505 7.41e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car03g02893 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02893 - - gmx:100787014 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02893 03 74221595 74232787 Car03g02893 03 74221595 74232787 ECH
Car03g02893 03 74221595 74232787 Car02g01509 02 42341673 42351602 PCT
Car04g00627 04 6201542 6205606 Car03g02893 03 74221595 74232787 PCT