Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02889 ATGGGCGGAGGTGGAGCATCGCCGAACGCCGAGGCTCAGTACACGACGGCGAAGATATCGGTATGGTGGGATATAGAAAACTGCCATGTTCCTAAGGGTTCCGATCCTCACGCAATCGCACAGAATATCAGTTCAGCACTTGTTCGTATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACGCGCATCCATATGTCTGTGCAGCATGCTCTCTCTAGCACCGGAATTTCACTCAATCATGTTCCCGCCGGTCTGAAAGATGCAAGTGATAAGAAGATCCTTGTCGACATGCTGTTTTGGGCAGTGGACAACCCTGCACCTGCTAATTATTTATTGATTTCGGGTGATCGAGATTTCTCTAATGCCCTCCATCAATTGCGAATGAGGAGGTATAATATCCTTCTCGCACAACCTCAAAAAGCATCTGTACCCTTGGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTCTTAGCAGGAGGACCTCCTTTGACTAATGGTGAATCACAACAACTTGATAATAGTAGCCTTTTATCATCTTCTGAAACCTTACAAATTCCTGTCTCAAATACCGCTCAGACGCAGCAACAGGTGGGTCCTTATTCTGAAGTTCATGCAGCAAATTCAAAAGTTCAAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGGAGACCAACTTGGAGAAGCCCTAGTCAACCAAATGGATCCAAAGCGTTGAATCCACCCCCAGTTGGACATCAAGATAACCGTAATAATGTAAACAATTATCGACCTGGCAACTATAATCCAAATGTTCCTCTAAGCGGATCCGCCACAAATTTTGTCCGCGCCAATTCTGATCAGTTATGGAGCAATAATGGTAGTACTCCACAGGGAAATCATCAAAATCATTATTCCCAGCCATTAAGACCAAACATTTTTCCATTGCAACCTCCTTTTGCATCTAATAATTCATATTCTTCAAATTCCCATACTTTTGCAACTTCACCGGTGCCACCTAGGACTAGTGGCCCTAACTTCATTACAGGGCCACATACAAATGTGCCAGATATTGGTAATCTGAACATTTCTGGTTATCCCAATAATGTTCATAACCCTCGAACTGTTCCGCAACGGAGTGGAGAGTTGAAACCAAATCCTAAGAATATTGCTCCACTTCCTGTAAGATCAACAGATGAACAGAATGGACACATGGTGCATAGCAGTAGCACGCAAGGCTATCCACATGGTCCAGAATATCAACCTACACCGTCGGCAGCAATGGGTAATAATAAACTTCCTGCTAATGGAATGTGGGGATCTCAAGGATGTCCAAAACCTTCTGAATATGTACAAGGCCTTATTGGGGTTGTTTTACTTACCCTGAACTCGCTAAAAAATTCAAAGATGATGCCAACTGAGGCAAATATAACTGATAGCATCCGTTATGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTGGAGAGTGCAATTGAGCAGCAGATGGTGGTGAAACAGAACTTAGGTGCTTTGACGTTGTATGTCGGTAAGAATGATAAACTTTGGAAGTGCGTAAATCCTTTAGGTGGAAATCCTAAACAGCACTCCAAAGAAATTTGGGACGAAATTCAAAAATTTTTAACGACCCCTGCTGGAAGATCGGCAATAATGGGCACACACTGCAAGTATGAAGCAGGTATTGTGATAAAGAACATGTGCTTTAAAGATCTTGCTTTGGGTGATGTCCTTCAGATATTGAACATGTTGATTCTCCATAAAAAATGGATAGTGCATCAACAGTCTGGCTGGCAACCACTCATCCTTACTCTTCCTGAGTCAAACCCCGACTCAGGGGTCACCGCAAGCACGTAG 1878 0.4409 MGGGGASPNAEAQYTTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIHMSVQHALSSTGISLNHVPAGLKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASVPLVAAAKSVWLWTSLLAGGPPLTNGESQQLDNSSLLSSSETLQIPVSNTAQTQQQVGPYSEVHAANSKVQNGGRGFDSRYQGRPTWRSPSQPNGSKALNPPPVGHQDNRNNVNNYRPGNYNPNVPLSGSATNFVRANSDQLWSNNGSTPQGNHQNHYSQPLRPNIFPLQPPFASNNSYSSNSHTFATSPVPPRTSGPNFITGPHTNVPDIGNLNISGYPNNVHNPRTVPQRSGELKPNPKNIAPLPVRSTDEQNGHMVHSSSTQGYPHGPEYQPTPSAAMGNNKLPANGMWGSQGCPKPSEYVQGLIGVVLLTLNSLKNSKMMPTEANITDSIRYGDPKHRNTDVKKALESAIEQQMVVKQNLGALTLYVGKNDKLWKCVNPLGGNPKQHSKEIWDEIQKFLTTPAGRSAIMGTHCKYEAGIVIKNMCFKDLALGDVLQILNMLILHKKWIVHQQSGWQPLILTLPESNPDSGVTAST 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02889 625 CDD PIN_limkain_b1_N_like 18 142 - -
Car03g02889 625 Pfam NYN domain 18 154 IPR021139 GO:0004540
Car03g02889 625 MobiDBLite consensus disorder prediction 251 309 - -
Car03g02889 625 MobiDBLite consensus disorder prediction 400 423 - -
Car03g02889 625 MobiDBLite consensus disorder prediction 316 375 - -
Car03g02889 625 MobiDBLite consensus disorder prediction 197 423 - -
Car03g02889 625 Pfam OST-HTH Associated domain 562 608 IPR025677 -
Car03g02889 625 PANTHER LIMKAIN B LKAP 2 610 IPR024768 GO:0005777|GO:0010468|GO:1903231
Car03g02889 625 MobiDBLite consensus disorder prediction 197 221 - -
Car03g02889 625 Gene3D - 9 161 - -
Car03g02889 625 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02889 Car-Chr3 74198750 74202997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02889 10 207 C2H2 Transcription Factor Family AT5G61190 69.500 5.32e-85 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02889 - - gmx:100794608 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02889 03 74198750 74202997 Car03g02889 03 74198750 74202997 ECH