Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02888 ATGCAGTATCGTGATCTTGCAAGCACTCATAATGAAATGGATGATGATTCAAAAGAGAATGAGGAATTGGTCTCAAACATAGTAATCATGGGTGTCTCCATGTTACTTATTGGATTGGTGACCATTGCTATTGTTGGCAACATAAACGGTGGTTCAGAAAACGAAGCGAATTTGAAGACCATTAATTCTATTTGTGAAAAAACAGAGGCACCAGAAAGTTGTCTTCATGTCTTAAAACACGTAGGTGAAAGAGCCACAGTTTTGAATTATGTTAAAGCTTCTATTAATGCAACCCTTGAAGAATTATCAGTGGTTAACATTCCTAAACCTTATCTTGAAAGGATCCTAACACCTTTGCAGGTACAATCTTATAAAGATTGTTTAGAATTGTTGAATATGGGAAAAGAAGAACTAGAATATTTATATATGGTGGCAAATTCCTCTATTAAAGATGAGGTATGCACTATAAACCCTGATGATGTTGTCAATAGTTTAAGTGCTATAATTTCATATCAACAAACTTGTACAATTGAATTGGTGAGAACAAATAGCTATGACCTTTTGGGATATTCATTGAAATTGCCAATTCTACTTACAAAGATTACACTAGCCATTGTTGATAATTTCCTCGAGAGGCCGAACATGGAAGGTCGACTACTCGAAGGGGGTAAAAAATGGATTCCAAGAGCTGAGCACAAATTTATGGAAGTTGAGGAGACAAGAATAGTTGTAGCTCAAGATGGAAGTGGTAATTTCAGAACCATAACTGAGTCACTAAATGAATGTGCAAAGAATAAAAATAGTTCATGTGTTATTTATGTGAAGAAAGGTAAATATGAGGAGAGAGTTGTGGTACCTAAGAAGTTAGATCAAGTGTTAATGTATGGTGATGGACCTATGAATACCATTGTCATTGGAATCAACACAAGACACATCACCATGGTCACAACACCCTTTCATTCAGCTACTTTTGTTGTAAAGGGGAAAGGATTCACCTGCAAAGACATGGGTTTCATTGCTCCAACTGATATACCAGGAGCACCAGCATTGAGTGTACTTTCTGATCATGCAGCATTCTTCAACTGCAAAATTGAAGGTGGAGAAGGAACCTTATACGCCATAGCACAACGCCAATTCTATCGAGACTGCGAAATTCGCGGTAGCGTAGACATAATCAAAGGAGACTCAACAACTCTAATTCAAAACTCAAAAATCATTATAACACCTCAAAACACATCTAACATAGTTTTAAGGAAAAATGTGGTGAGTGTTCAATCAAGGTTAGATAAATATGAAAGAACAGGACTTGTGATTCAAAACTGCACTATAATAGCATCATCAGAAGGTGAAGAAAATGATGATAATCTTGTTGGGTCAACTTGTTTGGGAATTCCACGTAGTGAATATTCAAGAACAATCATAATGGAATCGTTTCTTGGTGATGTTATACGTCCAAGAGGTTGGTGTAAATGGAGTGATAATTATGGAATTGATACAGCAACATTTCGTGAGTATAATAACAGAGGACCTGGTGCAAGAAATGATAAGAGGGTTCATTGGGAGAGTTATAGAACAGTTTCTATAGATCAGAGAAATGATGAAATGATGAGTTATACAGCTGCTGAGTTTATTCAAGCTGACCAATGGTTGATGAATTCTAGTATTCCATATGAATCTGGTTTTTTCTTCCATAAATAG 1698 0.3604 MQYRDLASTHNEMDDDSKENEELVSNIVIMGVSMLLIGLVTIAIVGNINGGSENEANLKTINSICEKTEAPESCLHVLKHVGERATVLNYVKASINATLEELSVVNIPKPYLERILTPLQVQSYKDCLELLNMGKEELEYLYMVANSSIKDEVCTINPDDVVNSLSAIISYQQTCTIELVRTNSYDLLGYSLKLPILLTKITLAIVDNFLERPNMEGRLLEGGKKWIPRAEHKFMEVEETRIVVAQDGSGNFRTITESLNECAKNKNSSCVIYVKKGKYEERVVVPKKLDQVLMYGDGPMNTIVIGINTRHITMVTTPFHSATFVVKGKGFTCKDMGFIAPTDIPGAPALSVLSDHAAFFNCKIEGGEGTLYAIAQRQFYRDCEIRGSVDIIKGDSTTLIQNSKIIITPQNTSNIVLRKNVVSVQSRLDKYERTGLVIQNCTIIASSEGEENDDNLVGSTCLGIPRSEYSRTIIMESFLGDVIRPRGWCKWSDNYGIDTATFREYNNRGPGARNDKRVHWESYRTVSIDQRNDEMMSYTAAEFIQADQWLMNSSIPYESGFFFHK 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02888 565 SMART PMEI_2 56 205 IPR006501 GO:0004857
Car03g02888 565 CDD PMEI-like_3 63 209 - -
Car03g02888 565 Pfam Pectinesterase 242 547 IPR000070 GO:0030599|GO:0042545
Car03g02888 565 Pfam Plant invertase/pectin methylesterase inhibitor 60 179 IPR006501 GO:0004857
Car03g02888 565 SUPERFAMILY Pectin lyase-like 240 557 IPR011050 -
Car03g02888 565 Gene3D - 237 561 IPR012334 -
Car03g02888 565 PANTHER PECTINESTERASE 14 562 - -
Car03g02888 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 209 IPR035513 -
Car03g02888 565 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 562 - -
Car03g02888 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 209 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02888 Car-Chr3 74195717 74197538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02888 59 562 Carbohydrate Esterase AT2G26450 33.460 2.37e-79 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02888 K01051 - gmx:102665007 695.656