Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02885 ATGGATCACCGATGGACCAAAGGTAGGCATGAATCTGGTGGCGGTGCCCGTGACCGGAGGCAATTTCATAAGGAAAAGGCATATGAGGAGTCCCTAATTGATGATTTGTATGAGGATTTTCGCATGCCGATCAACCAAAGGCCAACTGAAAATGTTGATTTGGACAATGTTGAACAAGCTTCACTAGACACACAATTAACATCATCTAATATTGGATTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGCAAAGATGAACAAGGAATAACCGAGCCAATAAAATCTGGGATTAGAGATCCAAGGTTGGGGATCGGTAAACAAGAGGAAGATGATTTTTTCACCGCAGAAGAAAATGTCCAGAGAAAAAAGCTTGATATTGAGTTGGAGGAGACAGAGGAGAATGTGAGGAAACGTGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAGGTGAAAGAAATTCGGAAGGTGTTTTACTGTGAACTCTGCAACAAGCAATACAAATTGGCAATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGGAAGCGATTCAAGCAAATGAAGGAAATGCATGGGAGTAGTAGTCGGGATGATAGGCAGAAGCGGGAGCAGCAGCGTCAAGAGAGAGAAATTGCCAAGTTTGCTCAAATTGCCGATGCTCAAAAGCAGCAACGGCTTCAACTGCAGCAAGAGTCTGGATCAGCACCAGTTTCAGCTTCCTCGGAATCTAGGACTGCTACTGCACTTACAGATCAGGAGCAACGAAATACTTTGAAGTTTGGCTTTTCTTCTAAAGGCACTGCTTCCAAGAGCACGATTAGTGCCAAGAAGCAAAATGTTCCAAAGAAGCAAAATGTTCCTGTGGCCTCCATATTTGGCAATGATAGTGATGATGAGTGA 927 0.4315 MDHRWTKGRHESGGGARDRRQFHKEKAYEESLIDDLYEDFRMPINQRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGIGKQEEDDFFTAEENVQRKKLDIELEETEENVRKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREIAKFAQIADAQKQQRLQLQQESGSAPVSASSESRTATALTDQEQRNTLKFGFSSKGTASKSTISAKKQNVPKKQNVPVASIFGNDSDDE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02885 308 MobiDBLite consensus disorder prediction 231 300 - -
Car03g02885 308 Pfam Zinc-finger double-stranded RNA-binding 163 190 IPR022755 -
Car03g02885 308 Pfam G-patch domain 69 109 IPR000467 GO:0003676
Car03g02885 308 SMART G-patch_5 66 111 IPR000467 GO:0003676
Car03g02885 308 MobiDBLite consensus disorder prediction 194 218 - -
Car03g02885 308 ProSiteProfiles G-patch domain profile. 68 113 IPR000467 GO:0003676
Car03g02885 308 MobiDBLite consensus disorder prediction 231 308 - -
Car03g02885 308 Coils Coil 118 145 - -
Car03g02885 308 ProSitePatterns Zinc finger C2H2 type domain signature. 165 187 IPR013087 -
Car03g02885 308 MobiDBLite consensus disorder prediction 1 23 - -
Car03g02885 308 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 308 - -
Car03g02885 308 SUPERFAMILY beta-beta-alpha zinc fingers 144 198 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02885 Car-Chr3 74170364 74174884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02885 14 308 C2H2 Transcription Factor Family AT5G26610 64.310 1.12e-123 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02885 - - mtr:MTR_7g111520 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02885 03 74170364 74174884 Car03g02885 03 74170364 74174884 ECH