Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02879 ATGGCGACACTTTTGTGGGTTCACATTGCAATAGGACTTGTCTTCTTCACCAACATGGGTCATGCCATATATGAGTTCAACAGAACCGAAGAAGAGCTCTCTTTTTTGGAAGCTTATGAACATGAAGCAGCATCCTATTCCTTATCCTTTGTTGAGGGAAATCCTCTGTTTGTAGGACTCACCCTTATCCACAATGCAGCTGTTAAAGGAGCAGTATGTCTGGATGGAACATTACCAGGTTACCATTTGCATCGAGGATATGGATCAGGTGCAAATAGTTGGCTTGTTAATTTAGAGGGAGGAGGATGGTGTAACAATGTTAGAACATGCGTTTATCGCAAGAAAACACGGCGTGGATCATCGTCATTCATGGAAAAGGAGATACCATTCACAGGAATACTGAGCAATAAAGCTGAACAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGGCTCATTTACTGGGGATGGTGAAGATCAGATTGCAGAACTTCAATTCAGAGGACAACGTATTTGGGCAGCTGCAATGGAAGATTTGATGTTAAAGGGAATGCATTTTGCTAAGCAGGCTCTTCTTTCCGGATGTTCTGCAGGCGGCCTAGCGACTATTATACACTGCGATGAATTTCGAGGTCTCTTTCCAAGGACTACTAAAGTCAAATGTCTAAGTGATGCAGGCTTGTTTCTTGATTCGATTGATATATCTGGCGAGCGTACCCTCAGGAATATGTACAATGGTGTTGTAGGTTTGCAGGATGCACAGAAGAATCTACCACAAATTTGTACTAATCACCTTGATCCTACCTCGTGCTTCTTTCCTCAGAATTTGATTAACAGTGTTAGAACTCCACTCTTTCTTCTTAATGCTGCTTATGATTCATGGCAGGTAAATTGTCTAACTTCATCATAA 930 0.4118 MATLLWVHIAIGLVFFTNMGHAIYEFNRTEEELSFLEAYEHEAASYSLSFVEGNPLFVGLTLIHNAAVKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEGGGWCNNVRTCVYRKKTRRGSSSFMEKEIPFTGILSNKAEQNPDFFNWNRVKLRYCDGGSFTGDGEDQIAELQFRGQRIWAAAMEDLMLKGMHFAKQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDSIDISGERTLRNMYNGVVGLQDAQKNLPQICTNHLDPTSCFFPQNLINSVRTPLFLLNAAYDSWQVNCLTSS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02879 309 PANTHER NOTUM-RELATED 3 305 IPR004963 GO:0016787
Car03g02879 309 PANTHER PECTIN ACETYLESTERASE 3 305 - -
Car03g02879 309 Pfam Pectinacetylesterase 55 305 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02879 Car-Chr3 74112121 74115380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02879 1 303 Carbohydrate Esterase AT3G05910 66.337 1.33e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02879 K19882 - gmx:100782401 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00648 04 6407962 6411758 Car03g02879 03 74112121 74115380 ECH
Car07g00428 07 3795167 3800678 Car03g02879 03 74112121 74115380 ECH
Car03g02879 03 74112121 74115380 Car03g02879 03 74112121 74115380 ECH
Car03g02879 03 74112121 74115380 Car04g00648 04 6407962 6411758 PCT