Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02859 ATGGGAAAAGCCAATAGTTCTAATTCTTCCTCATCTATTAGCAGCAACACCTACCACCAACATGTTATTTCAACAGCATCTTCTTTCACACAACAACTTCCCACAGATCTTAGCCTTGGACTCTCCATTTCCTCCACTCAACATTTTCATGTTGCCTCTTCTCTTTCAAGGGGGAAATGTCAATGGCAACAAAATCACCCTCTTTCACAAGGTGTTGAAGTAAATGATTGTAGTGATCATAGTAGCTTCTTTGTGAAGGTGTACATGGAAGGCATTCCAATCGGTAGAAAACTCAATATACTTGCTCATGAAACTTACCATGAGTTAGTAAACACCCTTGAACAAATGTTTGACACAACTATTCTCTGGGGAAATGAGATGGACAGAGTTCAACCAGAGAGATGTCATGTGTTAACTTATGAAGATGAAGAAGGGGATTTGGTCATGGTTGGTGATGTTCCTTGGGAGTAA 471 0.3992 MGKANSSNSSSSISSNTYHQHVISTASSFTQQLPTDLSLGLSISSTQHFHVASSLSRGKCQWQQNHPLSQGVEVNDCSDHSSFFVKVYMEGIPIGRKLNILAHETYHELVNTLEQMFDTTILWGNEMDRVQPERCHVLTYEDEEGDLVMVGDVPWE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02859 156 Pfam AUX/IAA family 73 156 IPR033389 -
Car03g02859 156 ProSiteProfiles PB1 domain profile. 82 156 IPR000270 GO:0005515
Car03g02859 156 PANTHER AUXIN-INDUCED PROTEIN 7 156 - -
Car03g02859 156 Gene3D - 76 156 - -
Car03g02859 156 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 156 IPR003311 GO:0005634|GO:0006355
Car03g02859 156 SUPERFAMILY CAD & PB1 domains 79 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02859 Car-Chr3 73931087 73932084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02859 86 155 B3 DNA Binding Superfamily AT4G23980 38.571 6.62e-11 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car03g02859 AUX_IAA 6.6e-21 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02859 K14484 - gmx:100818376 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02859 03 73931087 73932084 Car04g00676 04 6659271 6660421 PCT