Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02851 ATGGATAACGAACCCTTTCTCCTAATTAACCGTCCAGATTTACCCTTAACATCTTCCAAATCCTTCAACGACATCACCACCGTTCATCAACCCGAAATACAACACCAACAACAACCACCATTGTTTCTTCCCAAAAAAAAACTCAGTCGCTGCAAAACCGCACCAGCCATGTTCATTCTcccaaacctaaaaccaaaccaaccccaacttcccaaacctcaatccACTTCAATAATTCGACAAGGCATTTGGCTTCTTCTCATATACCTCTCAATCGGAGTCACAATTTACTCTTTCAATACTCACAATTTCTCTGGAATTGAAACTCACCCTATCGTTGATGCACTTTACTTTTGCATAGTTACAATGTGCACAATAGGTTACGGTGACATAGCACCTTTAACACCACTCACAAAAGTTTTTGCTTGTGTTTTCGTTTTAGTAGGTTTTGGTTTCATAGATATACTTCTTAGTGGACTTGTTAATTTCGTTTTAGATTTACAAGAAAACACAATTTTAACGGGTCTTCAAATGGGTGCTAGGGAAGGTTTTTCAGCTAGGGATTACATTGTTGATGTTGCCAAAGGTAGAATGAGGATTAGGTTGAAAGTTGGTTTAGCACttggtgttgttgttttgtgtattggtgttgggagtttggttttgtgttttgtCGAAGGTTTGAATTGGGTTGATTCTGTTTATTTGTCGGTTATGTCGGTTACGACGGTTGGTTATGGTGATACCGCTTTTAAGACACTTACTGGTAGATTGTTTGCTGCTATTTGGTTGTTGTTTTCTACTTTGATGGTTGCTAGAGCTTTTCTTTATTTGGCTGAGGCTAGAATTGATAGAAGACATAGGAGATTGGCTAAGAAGGTTTTGCATAGAGAAATTACTATTGAAGATTGGCTTGCTGCTGATATCAACAATACTGGTTTTATCAGtaagtcagaatatgtgatcttcaagctgaaagagatgggcaaaatacaagaaaaagatataatgcaaatctatgatcaattcaggaagattgatccctctaactgtgggaagataacattacctcatctcttggaGGGCAGGTCATAA 1095 0.3014 MDNEPFLLINRPDLPLTSSKSFNDITTVHQPEIQHQQQPPLFLPKKKLSRCKTAPAMFILPNLKPNQPQLPKPQSTSIIRQGIWLLLIYLSIGVTIYSFNTHNFSGIETHPIVDALYFCIVTMCTIGYGDIAPLTPLTKVFACVFVLVGFGFIDILLSGLVNFVLDLQENTILTGLQMGAREGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIGVGSLVLCFVEGLNWVDSVYLSVMSVTTVGYGDTAFKTLTGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFISKSEYVIFKLKEMGKIQEKDIMQIYDQFRKIDPSNCGKITLPHLLEGRS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02851 364 Gene3D - 66 176 - -
Car03g02851 364 Gene3D - 188 307 - -
Car03g02851 364 ProSitePatterns EF-hand calcium-binding domain. 308 320 IPR018247 -
Car03g02851 364 PRINTS Two pore domain K+ channel signature 121 149 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car03g02851 364 PRINTS Two pore domain K+ channel signature 242 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car03g02851 364 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 38 359 - -
Car03g02851 364 SUPERFAMILY Voltage-gated potassium channels 194 301 - -
Car03g02851 364 SUPERFAMILY EF-hand 298 359 IPR011992 -
Car03g02851 364 SUPERFAMILY Voltage-gated potassium channels 74 164 - -
Car03g02851 364 Pfam Ion channel 85 164 IPR013099 -
Car03g02851 364 Pfam Ion channel 211 280 IPR013099 -
Car03g02851 364 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 38 359 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02851 Car-Chr3 73878958 73881965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02851 46 360 Ion Channels AT4G01840 69.350 1.34e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02851 K05389 - gmx:100801488 562.762