Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02849 aTGAATGCAAAGATAATTATCTCTGCTGTTTCTCTTATCCTCGTAGTAGGTGTTGCCATTGGCGTTGTTGTAGCTGTTAATAAGAAGGGTGAAGACCCTGAGATTCAAACTCAACAGAGGTCTCTTAGAGTTATTTGCGAAAATGCAGAAGACCAAAAACTTTGTCATGAAACCCTTAGCTCTGTCCGTGGCCTCGACGCCGCTGATCCAAAGGCTTATATAGCTGCTGCCGTGAAAGCAACCACTGACAGTGTCATTAAGGCCTTTAACATGAGTGATAGGCTGACTACCGAGTACGGTAACAAGGACAGTGGCGTCAAGATGGCTCTTGACGACTGCAAAGACTTGTTGGAATTCGCGTTGGACAGTCTTGAACTGTCCAACAACTTGGTTCGTGACAACAACATTCAATCTCTTCAATATCAATCCCCTGATATGAGGAATTGGTTGAGTGCAGTTATCTCTTACCAACAGAGTTGCATGGAAGGCTTTAACAGCGAAAATGAAGGTGAGAAAAAGATCAAGGAGCAATTGCAAGTCCAGGGTTTGGACCGCGTGCAAAAGATCACCGGTGTTGCTCTTGACATTGTGAGTGGTTTGTCGAAGATACTCGAGCAGTTCAATTTGAAGTTTGATCTTAAACCTGCATCTCGTCGTCTTCTTGCTGAGGATACTGATGAAGAAGGATACCCTACATGGTTCTCTGCATCTGATCGCAAGCTTTTGGGTCAACTACAAGGAAAAGGATGGAGATCACGTGTTACTCCAAATGTTGTTGTTGCGAAGGATGGTAGTGGTCAATTTAAAACCATTAAGGACGCTATTGCCTCATATCCTAAGGGAAACAAGGGAAGATATATTATCTACGTGAAGGCTGGTGTTTATGACGAGTACATCACTGTTCCCAAGGAGGCAGTTAACATTCTTATGTACGGTGATGGCCCAcaaaagaccattgtaacaggaagcaaaaactttgctaatggtgtcaAGACCATGCAAACTGCCACCTTCGCCAATACCGCAAGTGGATTCATTGGAAAGGCAATGACATTTGAGAACACAGCCGGTCCTGATGGTCACCAAGCAGTTGCATTGAGAAACCAAGGAGATACATCTGCTTTCGTTGGTTGCCATATATTGGGTTACCAAGACACATTGTATGTTCAAACAAACAGACAATTCTACCGAAACTGTGTTATCTCTGGTACCATTGATTTCATCTTTGGAACATCTGCAACATTGATCCAACACTCTGTCATCATCGTAAGGAAGCCCAACGACAACCAATTCAACACAGTAACAGCAGACGGAACAGCAGAAAAGAACATGGCTACTGGTATTGTGATCCAGGATTGTGAGATAGTACCAGAACAAGCATTGTACCCAGTGAGATTCCAAATAAAATCATACTTGGGTAGACCATGGAAGGCATATTCAAAGACAGTTGTGATGGAATCAACAATTGGTGACTTTCTTCACCCAGATGGTTGGTTCCCATGGACAGGATCAAACTTCGAAAATACATTGTACTATGCAGAGTATGCCAACACAGGACCAGGTGCCAATGTTCAAGGAAGAATCAAGTGGAAGGGTTATCACGGAGTCATTAGCAAGGCTGAGGCTACCCAATTCACTGCTGCTGAATTCCTTAAGGCTGGACCCAAATCTGGAACTGACTGGTTGAAGGCTCTTCATGTTCCTCACTACCTTGGCTTCAAGAATTAA 1728 0.4253 MNAKIIISAVSLILVVGVAIGVVVAVNKKGEDPEIQTQQRSLRVICENAEDQKLCHETLSSVRGLDAADPKAYIAAAVKATTDSVIKAFNMSDRLTTEYGNKDSGVKMALDDCKDLLEFALDSLELSNNLVRDNNIQSLQYQSPDMRNWLSAVISYQQSCMEGFNSENEGEKKIKEQLQVQGLDRVQKITGVALDIVSGLSKILEQFNLKFDLKPASRRLLAEDTDEEGYPTWFSASDRKLLGQLQGKGWRSRVTPNVVVAKDGSGQFKTIKDAIASYPKGNKGRYIIYVKAGVYDEYITVPKEAVNILMYGDGPQKTIVTGSKNFANGVKTMQTATFANTASGFIGKAMTFENTAGPDGHQAVALRNQGDTSAFVGCHILGYQDTLYVQTNRQFYRNCVISGTIDFIFGTSATLIQHSVIIVRKPNDNQFNTVTADGTAEKNMATGIVIQDCEIVPEQALYPVRFQIKSYLGRPWKAYSKTVVMESTIGDFLHPDGWFPWTGSNFENTLYYAEYANTGPGANVQGRIKWKGYHGVISKAEATQFTAAEFLKAGPKSGTDWLKALHVPHYLGFKN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02849 575 CDD PMEI-like_3 45 202 - -
Car03g02849 575 SUPERFAMILY Pectin lyase-like 254 568 IPR011050 -
Car03g02849 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 200 IPR035513 -
Car03g02849 575 PANTHER PECTINESTERASE 3 573 - -
Car03g02849 575 Pfam Plant invertase/pectin methylesterase inhibitor 43 196 IPR006501 GO:0004857
Car03g02849 575 SMART PMEI_2 37 196 IPR006501 GO:0004857
Car03g02849 575 PANTHER PECTINESTERASE 3 573 - -
Car03g02849 575 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Car03g02849 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 177 IPR006501 GO:0004857
Car03g02849 575 Pfam Pectinesterase 257 552 IPR000070 GO:0030599|GO:0042545
Car03g02849 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 201 IPR035513 -
Car03g02849 575 Gene3D - 251 573 IPR012334 -
Car03g02849 575 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02849 Car-Chr3 73868970 73871078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02849 1 573 Carbohydrate Esterase AT2G47040 40.224 7.92e-139 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02849 K01051 - gmx:100781507 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02849 03 73868970 73871078 Car04g00683 04 6721821 6723976 PCT