Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02847 ATGATGGAAGATGCATACTTGTCGGCGAAGATTTCAGTTTGGTGGGACATCGAAAACTGTCAAGTTCCTAAAAATTTCAACGCTAACTCCATTGCTCAAAACATTGCCTCCGCTCTCTTCAACACTAACTTCCAAGGCCCAATCTCCATCTCCGCTTACGGCGACACCACTCGCATCCCCTTTAACGTTCAGCACGCGCTCTCTTCAACTGGCATCTCCCTCAACCACGTCCCCGCCGGTGTAAAAGATGCAGGTAACAATGTTAAGATACTTGTTGACATGCTGCTATGGGCTGTAGACAATCCTGCCCCTGCAAACTATTTGTTGATTTCTGGTGATAGAGACTTCTCAAATGCGCTTCATCAACTTCGAATGAGAAGGTACAACATTCTTCTTGCTCAACCATTACGAGCTTCTGCATCTCTTACTGCCGCCGCTAAAATTGCCTGGCTGTGGCCCACACTGATTGCTGGTGGCCCCCCTCACTTCACTGAACCCAACAACAACGATACCCTTCAAAATCAAAACCCTAGCAAACTTGGATATCAACCAAAATCATCGATAACCTCGAACTCGAAAATAGAACCAGAGAGTGACAATAACAATTCAATTCCTAATCCTGAACATTCAAAGACATCAAAATTGTTTCGATTAGCACCACATGAATTCTTTTCTAGTAATGACAACCCCGCAATAATCCCAATTACTATGGACTCAACAACAAGCATTACTTGTTGCAAATTAAATGATAGTCATGATCTACATCATAATAACAGGCAAATAATGCTCCCAATATCTTCTACTTATGACCATGCACCTATTTTGTCTGCAATTAATGTTTTACATGGAAGTTCCCCAATTGTAGTGAGGGAAACCAAAGAAGGTTCTAAACCAATAAGTAGAAGCTTAACTGCATCATCAAAAGTACAGTTTAATGGGAATTTGAACCAGAAGATTCATATTGTAAGGAGAGTTAAGAGTTTGCCAACGGTATCATCATGTGAGCAAGTACAAGGAGCGGTTGATGTTATTATTGTAACTTTGAATACTCTCAAGAATGAAATGATTTTTCCTACTGAAGAAAATATAACCGATTGTATTCGATATGGTGATCCCAAGTTTCAGACAATTGATGTTATGAAGGCTTTAGATTGTGCAATAGAACAACAAAGGGTAGTGAAGCGACGCTTTGGTGCATTGTATTTGTATGTTGTTGCAAATGGGAATCTCTGGAAGTGTGTGAACCCTTTAGGCGGAGATTCGAGTCATTTCCCAGATCCAATATGGGTTAGAATTAAGCAATTCCTTACTTCATCCCCAGGAAGATCATCGATTTTGGCATCTCGTTGCAGATATGAAGCATCTTTAATTCTTAAGGTATTGTGCCTTGGAGAGCTTGTGTTGGGTGATGTACTTAAGATTTTGGAGATTATAATCACAGTCAAGAAATGGATTTTACATAATCATTTTGGATGGCAGCCGATTACTATTTCACTTACAGATGATAATTGA 1512 0.4001 MMEDAYLSAKISVWWDIENCQVPKNFNANSIAQNIASALFNTNFQGPISISAYGDTTRIPFNVQHALSSTGISLNHVPAGVKDAGNNVKILVDMLLWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPLRASASLTAAAKIAWLWPTLIAGGPPHFTEPNNNDTLQNQNPSKLGYQPKSSITSNSKIEPESDNNNSIPNPEHSKTSKLFRLAPHEFFSSNDNPAIIPITMDSTTSITCCKLNDSHDLHHNNRQIMLPISSTYDHAPILSAINVLHGSSPIVVRETKEGSKPISRSLTASSKVQFNGNLNQKIHIVRRVKSLPTVSSCEQVQGAVDVIIVTLNTLKNEMIFPTEENITDCIRYGDPKFQTIDVMKALDCAIEQQRVVKRRFGALYLYVVANGNLWKCVNPLGGDSSHFPDPIWVRIKQFLTSSPGRSSILASRCRYEASLILKVLCLGELVLGDVLKILEIIITVKKWILHNHFGWQPITISLTDDN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02847 503 Pfam NYN domain 10 146 IPR021139 GO:0004540
Car03g02847 503 MobiDBLite consensus disorder prediction 162 210 - -
Car03g02847 503 CDD PIN_limkain_b1_N_like 10 135 - -
Car03g02847 503 Gene3D - 7 151 - -
Car03g02847 503 PANTHER LIMKAIN B LKAP 3 491 IPR024768 GO:0005777|GO:0010468|GO:1903231
Car03g02847 503 MobiDBLite consensus disorder prediction 164 210 - -
Car03g02847 503 PANTHER ENDONUCLEASE OR GLYCOSYL HYDROLASE WITH C2H2-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED 3 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02847 Car-Chr3 73859626 73861509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02847 3 161 C2H2 Transcription Factor Family AT5G61190 69.811 4.13e-70 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02847 - K17573 mtr:MTR_7g110390 578.17