Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02844 ATGGAAGCTTTTCATATGTACGGTATGGAGGGTGGTTCCTCTGATCTAAGGATTACGGGGAAAAGGTCTTTAGAATGGGATTTGAATGATTGGAAATGGGATGGTGATGTTTTCGTAGCTTCTAGGAGGTTAAGTCCTGTGCCTGAGCACAGGCAATTTTTACCTCTTCCCGGTGGTGGTTCATCTAACTCAAATAGTTCATCTTCTTGTTCTGAAGATTTAGATCTTGGGAACAAGGAAGGTGAAAGGAAAAGGAGGGTTATTGTTGTGGAGGATGAACTAAGTTTGAATAAGGAAGCTGGTAGTCTTAGCTTAAAGATTGGTGGTGGTAGTGCTCAAATTGCTACATGGGAAGGAAACAGTGGGAAGAAAAGTAGAGTAGCTGCTGGTGGTACTTCAAGTAGAGCATTTTGTCAGGTCGAGGATTGTCGTGCGGATCTCAACAATGCTAAAGATTATCACAGACGTCATAAAGTTTGTGAGATTCACTCAAAGGCCTGTAAAGCCCTTGTTGGAAACACCATGCAGCGGTTCTGCCAACAATGTAGTAGGTTTCACATGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGTCGAAGACGTTTGGCAGGCCATAATAAAAGAAGGAGGAAAACAAATCAGGATGCAGTTCCTAATGGAAGTCCCCTGAACGATGATCAGACTAGTAGTTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCAGCCTGACAGGACAAATCAGACCGCAGATCAGGATCTGCTAACTCATCTTTTAAGGAGTCTTGCTAATCAGAATGGTGAACAAGGGGCAAAGAACTTGTCTAACCTTTTACGGGAACCGGAGAATCTGTTGAAAGAAGGGTCTTCATCTGGGAAGTCGGAGATGATTTCTACTTTATTTACTAATTGTTCTCAAGGTTCTCCAACTGTTACAAGACAGAATCAAACTGTTTCTATTAGTGAAATTCAACATCAAGTGATGCATGCACATGATGCTAGGGCTGCTGATCAACAAACCACATCTTCTGCAAAGCCCAGTGTTTCAAATAGCCCTCCAGCTTATTCAGAAGCCAGAGACAGTACTGCTGGGCAGACCAAGATGAATAATTTTGATCTGAATGACATCTATGTTGACTCAGATGACGGCATAGAGGACATAGAAAGGTTTCCTGTCTCTGTAAACCTTGGCACTAGCTCTCTTGATTACCCATGGATGCAACAAGATTCACATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCCACTGGTGAAGCTCAGAGTCTCACGGATCGGATTGTTTTTAAACTCTTTGGTAAAGAACCTAGTGATTTTCCTCTTGTACTCAGAGCACAGATTCTTGACTGGTTATCCCACAGTCCAACTGATATTGAAAGCTATATACGACCTGGTTGTGTCATTTTGACTATTTATCTGCGTCAGGCTGAGGTTGTGTGGGAGGAGCTTTGCTTTGATCTGACTTCCAGTTTGAATAGGCTTCTGGATGTCTCAGATGACGATTTTTGGAAAACTGGATGGGTTCACATAAGGGTGCAGCATCAGATAGCCTTCATTTTCAATGGCCAGGTTGTCATCGATACATCCCTACCTTTCAGGAGTAACAATTATAGTAAGATTTTGAGTGTAAGTCCAATTGCTGTACCAGCATCAAAGACAGCTCAATTTTCTGTTAAGGGTATCAACCTGACTCGCCCTGCCACTAGGTTATTGTGTGCTTTAGAAGGGAATTATTTGGTCTGTGAAGATACTCATGAGTCTATGGATCAATGCTCCAAGGATCTTGATGAGCTTCAGTGCGTCCAGTTTTCGTGTTCTGTCCCTGTGATGAATGGGCGGGGATTTATTGAGATTGAGGACCAGGGTTTGAGCAGCAGTTTTTTTCCTTTCATAGTCGTGGAAGAGGATGTTTGCTCTGAAATCTGTGTGCTTGAGCCTTTACTGGAATCAAGCGATACTGATTCAGATGTTGAAAGGGCTGGACGGATCCAAGCAAAAAATCAAGCCATCGATTTCATTCATGAAATGGGCTGGCTTCTGCACAGAAGCCAAATAAAATCTAGGATGGTTCACTTGAGTTCTAGTGCAGATCTGTTTCCATTAGATCGATTCAATTGGCTGATGGAGTTCTCTATGGACCATGATTGGTGTGCAGTAGTTAAAAAACTATTGAACCTCCTGCTTAATGGAACAGTGAGTACAGGAGACCACGCATCCCTGTATCTTGCACTTTCAGATATGGGTCTCCTTCACAGAGCTGTGAGGAGAAACAGCAGGCAGTTGGTGGAGCTTCTTTTGAGATATGTTCCTCAAAATATTTCAGATACACTAGGACCTGAAGACAAGGCGCTGGTTAACAGAGAGAACCAAAACTTCTTGTTTAGACCTGATGTTGTTGGTCCTGCTGGTTTGACGCCACTCCATATAGCAGCCGGGAAAGATGGTTCTGAGGATGTACTTGATGCTTTGACTAATGATCCTTGCATGGTCGGAATTGAAGCATGGAAGAGTGCTCGTGACAGCACGGGGTCCACACCTGAGGATTATGCACGTTTACGTGGTCATTATACTTACATCCACTTGCTGCAAAAGAAAATCAACAAGAGACAAGGAGGGGCTCACGTGGTGGTTGATATTCCTAGCAATCTGACAAGGTTCGTTACAAGCCAGAATAAAGATGAATCGTCTACTACGTTTGAGATTGGAAATGCTGAAGTTAGAAATGTCCAAAAGCAATGCAAACTTTGCGATCATAAGTTGTCATGTAGAACTGCTGTGAGGAAGTCTTTTGTATACAGACCTGCAATGCTGTCAATGGTGGCCATAGCAGCAGTCTGTGTCTGTGTGGCTCTTCTGTTCAAAAGCTCGCCCGAAGTTCTGTATATATTCCGACCTTTCAGGTGGGAGTCGTTGGAGTTTGGAACAAGCTAA 2988 0.4301 MEAFHMYGMEGGSSDLRITGKRSLEWDLNDWKWDGDVFVASRRLSPVPEHRQFLPLPGGGSSNSNSSSSCSEDLDLGNKEGERKRRVIVVEDELSLNKEAGSLSLKIGGGSAQIATWEGNSGKKSRVAAGGTSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKACKALVGNTMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNQDAVPNGSPLNDDQTSSYLLISLLKILSNMQPDRTNQTADQDLLTHLLRSLANQNGEQGAKNLSNLLREPENLLKEGSSSGKSEMISTLFTNCSQGSPTVTRQNQTVSISEIQHQVMHAHDARAADQQTTSSAKPSVSNSPPAYSEARDSTAGQTKMNNFDLNDIYVDSDDGIEDIERFPVSVNLGTSSLDYPWMQQDSHQSSPPQTSGNSDSASAQSPSSSTGEAQSLTDRIVFKLFGKEPSDFPLVLRAQILDWLSHSPTDIESYIRPGCVILTIYLRQAEVVWEELCFDLTSSLNRLLDVSDDDFWKTGWVHIRVQHQIAFIFNGQVVIDTSLPFRSNNYSKILSVSPIAVPASKTAQFSVKGINLTRPATRLLCALEGNYLVCEDTHESMDQCSKDLDELQCVQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICVLEPLLESSDTDSDVERAGRIQAKNQAIDFIHEMGWLLHRSQIKSRMVHLSSSADLFPLDRFNWLMEFSMDHDWCAVVKKLLNLLLNGTVSTGDHASLYLALSDMGLLHRAVRRNSRQLVELLLRYVPQNISDTLGPEDKALVNRENQNFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKSARDSTGSTPEDYARLRGHYTYIHLLQKKINKRQGGAHVVVDIPSNLTRFVTSQNKDESSTTFEIGNAEVRNVQKQCKLCDHKLSCRTAVRKSFVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYIFRPFRWESLEFGTS 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02844 995 Pfam SBP domain 138 211 IPR004333 GO:0003677
Car03g02844 995 MobiDBLite consensus disorder prediction 327 369 - -
Car03g02844 995 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 15 994 IPR044817 GO:0003677
Car03g02844 995 SUPERFAMILY SBT domain 136 216 IPR036893 GO:0003677|GO:0005634
Car03g02844 995 MobiDBLite consensus disorder prediction 57 74 - -
Car03g02844 995 Gene3D - 128 199 IPR036893 GO:0003677|GO:0005634
Car03g02844 995 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 15 994 - -
Car03g02844 995 MobiDBLite consensus disorder prediction 337 369 - -
Car03g02844 995 MobiDBLite consensus disorder prediction 403 438 - -
Car03g02844 995 Gene3D - 738 894 IPR036770 -
Car03g02844 995 ProSiteProfiles Zinc finger SBP-type profile. 135 212 IPR004333 GO:0003677
Car03g02844 995 SUPERFAMILY Ankyrin repeat 763 883 IPR036770 -
Car03g02844 995 MobiDBLite consensus disorder prediction 202 224 - -
Car03g02844 995 MobiDBLite consensus disorder prediction 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02844 Car-Chr3 73828343 73836009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02844 1 995 SBP-box Gene Family AT3G60030 54.229 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Car03g02844 SBP 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02844 - - gmx:100809806 1571.99