Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02839 ATGTATGGTGGAGtaggggtggacatcgggcggGTTTTTCCTTCAGATCACACTCACTGCTACACTAATTTGGTACTATTAGGGTTGTGTTCAAGACCTAAAGCAAAGGGTTTTTTAGGGGTTGTTGTACCTGCTACTGGATTTACAGATAAGAATGCAAGTTCAGGTGGTGTTGAAAAGTTACCTGAGGAAATGAATGACATGAAAATTAGGGATGATAAGGAAATGGAAGCAGCCACTGTGGTTGATGGAAATGGAACTGAAACTGGACATATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGACTATAAGCTACATGGCCGAGCGTGTTGTTGGACATGGATCTTTTGGTGTAGTTTTTCAGGCAAAGTGTTTGGAGACTGGGGAAACTGTGGCCATAAAGAAGGTTCTTCAAGACAAGAGGTACAAGAACCGGGAATTGCAAACCATGCGCCTTTTGGACCACCCTAATGTTGTATCTTTGAAGCACTGCTTCTTCTCAACGACTGAAAAGGATGAGCTTTATCTTAACTTGGTGCTTGAGTATGTTCCTGAGACTGTCAGTCGAGTGATTAGACACTACAACAAAATGAATCAAAGAATGCCTTTGATATATGTCAAACTTTATTCTTACCAGATTTGCAGAGCACTTGCTTATATTCACAATAGTATTGGAGTATGTCACAGGGATATTAAACCTCAAAATTTACTGGTGAATCCTCACACCCATCAACTGAAAATATGTGACTTTGGAAGTGCTAAAGTCTTGGTAAAAGGTGAACCAAACATATCTTACATATGTTCTCGGTACTATAGAGCTCCGGAGCTTATATTCGGTGCGACTGAGTATACCACAGCCATTGACATCTGGTCAGCTGGTTGCGTACTTGGCGAACTGTTGCTTGGCCAGCCGCTCTTTCCCGGTGAGAGTGGAGTAGACCAACTTGTCGAAATTATCAAGGTTTTAGGTACCCCAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTATACAGAGTTTAAATTTCCTCAAATCAAAGCTCATCCATGGCACAAGATCTTTCACAAGAGAATGCCACCTGAAGCTGTGGATCTTGTCTCAAGACTATTACAATACTCTCCAAATCTTCGAAGCACAGCTTTGGAGGCTTTGGTTCATCCATTCTTTGACGAGCTGCGCGATCCAAACACTCGGTTACCGAACGGGCGTTTCCTTCCTCCATTATTCAACTTCAAAGTCAATGAACTCAAGGTCCAAGCTAGGCATCATCATTCACATAAAAAACATAGCCACTCACATTCTCATAAATCATATGGAACCTCACCACAACCACCTGCGCCTTACTACAATAATGCCTCTGGCATTTTTGATGTAAGATCATTTGGTGCCATTGGAGATGGAAAAAAAGATGATACTGAATCATTTAAGATGGCATGGGATACTGCTTGTCAAAGTCAATTAGAAGATAATGTTATTCTTGTTCCGCAAGGTTTCTCGTTCATTGTTCAATCTATTATTTTCACCGGTCCTTGTCAAGGTGACTTAGTATTCAAGGTGGATGGGACTGTTATGCCACCTGATGGACCTGAATCTTGGCCAAAGAACAACAGTAGGCGCCAATGGCTGGTATTTTACAGAATCAATGGAATGTCACTAGAAGGAAGTGGTTTAATAGATGGGAGGGGACAAAAATGGTGGGACCTTCCTTGCAAGCCTCACAAGGGATCAAATGTGACAGCATTAGGACCTTGTGATAGCCCAATTGCCATAAGGTTTTTTATGTGTTCAAACTTGACTGTGCAAGGTCTTAAAGTGAAGAACAGCCCTCAATTTAATTTCAGATTTGATGACTGCAAAAAAGTCTATATAGAATCAATTTATATTACAGCTCCAAAACTAAGCCCCAACACGGATGGAATTCACTTAGAAAATGCCAATGACGTGAAAATATATAATTCTGTGATTTCCAATGGTGATGATTGTGTGTCCATCGGATCTGGGTGCTATGATGTTGATATAAAAAACATTACATGTGGACCTAGTCATGGAATTAGCATTGGTAGTTTAGGAAATCACAATTCAAAAGCATGTGTATCAAACATTACAGTTCGAGACTCGATCATAAAAATGTCAGATAATGGAGTTAGAATCAAGACATGGCAAGGTGGATCAGGATCGGTATCAGGGGTGACATTCAATAATATTAATATGATTAGTGTAAGAAATCCAATCATAATTGACCAATTCTATTGCCTCACTAAAGAACATTGCACCAACAAAACCTCAGCAGTATTTGTATCAAACATTCTTTACACAGACATTAAGGGAACTTATGATATAAGAAGCCCTCCTATGCATTTTGCATGTAGCGACTCTGTCCCTTGCACCAACATAACACTATCAGATATTGAGCTTCTTCCATCTCAAGGTGATATAGTATATGATCCTTTTTGTTGGAATGCTTATGGAGATTTGGAGACACTAACTATTCCACCTGTCTCTTGTTTGCTAGTGGGAACTCCTCAATCCTTGTTAGACTATGACATAGATCATTGTTGA 2574 0.3955 MYGGVGVDIGRVFPSDHTHCYTNLVLLGLCSRPKAKGFLGVVVPATGFTDKNASSGGVEKLPEEMNDMKIRDDKEMEAATVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNKMNQRMPLIYVKLYSYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRFLPPLFNFKVNELKVQARHHHSHKKHSHSHSHKSYGTSPQPPAPYYNNASGIFDVRSFGAIGDGKKDDTESFKMAWDTACQSQLEDNVILVPQGFSFIVQSIIFTGPCQGDLVFKVDGTVMPPDGPESWPKNNSRRQWLVFYRINGMSLEGSGLIDGRGQKWWDLPCKPHKGSNVTALGPCDSPIAIRFFMCSNLTVQGLKVKNSPQFNFRFDDCKKVYIESIYITAPKLSPNTDGIHLENANDVKIYNSVISNGDDCVSIGSGCYDVDIKNITCGPSHGISIGSLGNHNSKACVSNITVRDSIIKMSDNGVRIKTWQGGSGSVSGVTFNNINMISVRNPIIIDQFYCLTKEHCTNKTSAVFVSNILYTDIKGTYDIRSPPMHFACSDSVPCTNITLSDIELLPSQGDIVYDPFCWNAYGDLETLTIPPVSCLLVGTPQSLLDYDIDHC 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02839 857 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02839 857 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02839 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Car03g02839 857 Gene3D Transferase(Phosphotransferase) domain 1 190 438 - -
Car03g02839 857 MobiDBLite consensus disorder prediction 425 440 - -
Car03g02839 857 SUPERFAMILY Pectin lyase-like 458 847 IPR011050 -
Car03g02839 857 CDD STKc_GSK3 105 397 IPR039192 -
Car03g02839 857 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02839 857 SMART pbh1 732 753 IPR006626 -
Car03g02839 857 SMART pbh1 703 724 IPR006626 -
Car03g02839 857 SMART pbh1 623 649 IPR006626 -
Car03g02839 857 SMART pbh1 600 622 IPR006626 -
Car03g02839 857 SMART pbh1 650 671 IPR006626 -
Car03g02839 857 SMART pbh1 673 693 IPR006626 -
Car03g02839 857 SUPERFAMILY Protein kinase-like (PK-like) 109 420 IPR011009 -
Car03g02839 857 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 42 424 - -
Car03g02839 857 Pfam Glycosyl hydrolases family 28 493 810 IPR000743 GO:0004650|GO:0005975
Car03g02839 857 ProSitePatterns Protein kinases ATP-binding region signature. 116 140 IPR017441 GO:0005524
Car03g02839 857 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Car03g02839 857 MobiDBLite consensus disorder prediction 425 449 - -
Car03g02839 857 Gene3D - 452 840 IPR012334 -
Car03g02839 857 ProSitePatterns Polygalacturonase active site. 680 693 IPR000743 GO:0004650|GO:0005975
Car03g02839 857 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 42 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02839 Car-Chr3 73764964 73773117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02839 455 857 Glycoside Hydrolase AT1G02460 71.007 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Car03g02839 Glyco_hydro_28 2.5e-84 CL0268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02839 K00924 - gmx:100778836 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02839 03 73764964 73773117 Car04g00694 04 6797768 6800456 PCT