Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02827 ATGGAAAAAGGGCGTGCGAATATGAATGATTATGCTATTGGATCATCTTATGATGAGTATTCATTTCCAAGCGTGTTTGATTTATCTGAAGAAAAGAGCTCTGTAGGGTTCCTGGAGTTATTGGGATTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAGTGTTCAGATCAGGTTTTCAATAATCATCAACAACCTGCAACTCCTAACTCTTCTTCTATTTCATCTACGTCTAGTGAAGCAATCAATGATGAAAACACTAAAACTCTTCACGACCAACCTCATAATATTCATAAACCGCTAAAACAGTTGAAAGTTAAGAAGACAAATGAGAAGAGACAGAGAGAAGCTAGAATAgctttcatgacgaaaagcgaggtggatcatctggaagatgggtacagatggagaaagtacggtcagaaagccgttaaaaacagcccctttccaagGAGCTATTATCGTTGCACTAGTGTTTCATGTAATGTGAAGAAACACGTGGAGAGATCTTTAAGTGATCCAAGCATTGTAATGACAACCTACGAAGGAAAACACACACATCCAAACCCAATTATGTCTCGTAGCTCAGCCGGTATCATCTCCTCCTCCGAATGCACCACCAACTACGTCTCTCAATATTATAATCAACACCGTCAACAACTCATCTTCAATACTTTGTCCTCTTTGGGTTTTCCTTCAAAGAATACTAATAATATTGCCGCCACTTTTCCTCAAGAAAAACCACTTTGTAATAACAATTCAAGGGTAAGGGATTATGGACTTCTTGAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGTAG 837 0.3202 MEKGRANMNDYAIGSSYDEYSFPSVFDLSEEKSSVGFLELLGLQXXXXXXXXXXXXKECSDQVFNNHQQPATPNSSSISSTSSEAINDENTKTLHDQPHNIHKPLKQLKVKKTNEKRQREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLSDPSIVMTTYEGKHTHPNPIMSRSSAGIISSSECTTNYVSQYYNQHRQQLIFNTLSSLGFPSKNTNNIAATFPQEKPLCNNNSRVRDYGLLEDVVPSHMFKEE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02827 278 MobiDBLite consensus disorder prediction 59 99 - -
Car03g02827 278 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02827 278 PIRSF WRKY_txn_fact_IIc 1 58 IPR017396 GO:0003700
Car03g02827 278 PIRSF WRKY_txn_fact_IIc 46 278 IPR017396 GO:0003700
Car03g02827 278 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 270 IPR044810 GO:0003700
Car03g02827 278 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02827 278 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02827 278 MobiDBLite consensus disorder prediction 61 88 - -
Car03g02827 278 PANTHER WRKY TRANSCRIPTION FACTOR 14 270 - -
Car03g02827 278 SUPERFAMILY WRKY DNA-binding domain 126 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02827 278 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02827 Car-Chr3 73664001 73666145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02827 59 278 WRKY Transcription Factor Family AT2G47260 51.220 6.05e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g02827 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02827 - - cam:101495104 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02827 03 73664001 73666145 Car04g00708 04 6959399 6961336 PCT