Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02819 ATGGACAATATTAATGATTCCCCTCAACATGAGTCAGAACCATCTAATTTAGAACTCAAACCAGAATCTCAAGCATCTAAGAAACGGAAAATGGTTGAGAAAAGAGTTGTGAGAGTGAGGGTAGGAGAGAATGTTAGTAAGCTGAAGAATGAAGGACTTCCTACAGATTTTGGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGCTCTCCATATCCAAGGGGATATTATAGATGCAGCGCATCAAAGGGATGTTCAGCAAAAAAGCAAGTTGAGAGAAGTAGCACAGATTCTTCAATGCTTATCATCACTTATACTTCAACACATAACCATCCAGATCCTACAACTTTACTTCAACAACCAAAACAATCCAAAACCAAAACAATTgaagaacaagaacatatagaagaagaaatgattaatagtaataataataagaataagaataagaGCACTATAACCAATGATCAAATGACAAATGAAGAAAATTATCATTACTTGCAATCTCCAATAGACCAAGAAGATCCTTTCAAATTACACACAGAAATAAACCATGCTGACAAAATAGATATTCTGTTAGAGGAAGAGCCTCTCTGTTATGCAAAGTTGAAGAATTTGTCAGCATCTAAATCAGAAGAACTTGACTTTTTCGATGAGCTTGAGGAGTTGCCTATGTCTTCATCTTTTTTACACTTTACGAGGAGCATTTTTTCTGATGAAAGGATTCCTGTTGCTCCTTCTTGA 747 0.336 MDNINDSPQHESEPSNLELKPESQASKKRKMVEKRVVRVRVGENVSKLKNEGLPTDFGSWRKYGQKPIKGSPYPRGYYRCSASKGCSAKKQVERSSTDSSMLIITYTSTHNHPDPTTLLQQPKQSKTKTIEEQEHIEEEMINSNNNKNKNKSTITNDQMTNEENYHYLQSPIDQEDPFKLHTEINHADKIDILLEEEPLCYAKLKNLSASKSEELDFFDELEELPMSSSFLHFTRSIFSDERIPVAPS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02819 248 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 233 IPR044810 GO:0003700
Car03g02819 248 MobiDBLite consensus disorder prediction 13 32 - -
Car03g02819 248 MobiDBLite consensus disorder prediction 1 32 - -
Car03g02819 248 ProSiteProfiles WRKY domain profile. 49 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02819 248 SUPERFAMILY WRKY DNA-binding domain 51 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02819 248 MobiDBLite consensus disorder prediction 49 75 - -
Car03g02819 248 Pfam WRKY DNA -binding domain 58 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g02819 248 Gene3D WRKY domain 39 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g02819 248 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 17 233 - -
Car03g02819 248 SMART WRKY_cls 54 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02819 Car-Chr3 73590522 73593090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02819 9 116 WRKY Transcription Factor Family AT2G34830 58.716 1.65e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g02819 WRKY 4.6e-24 CL0274