Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02817 ATGTTCAATGATCATCAAAATCAACAACAAGAATTTGAAGTTGGTAATTTCATGTTAGAAGAGATCAACTTCGACCCTTTTCACCAACCAACACAACAATTTCAAGAAACAATAACAACATGGCCAAAAAATCACAATCATAAACTCTCATCAATTCCAACAAAACCTTTACAAAACAATATATCTTTATCATCCTTAGAGATTCTAAGAAACCATGGAACCAGATTCATGAAAAACATAACAAATACTAAAAAAACTTCATTAGATAATGAACAAGAAAAGGTTTCAGCAGAAGGAATAATTAGAGTAGCTGGAACAAGATATGCTCAAAAATATTCTTCTCATTGGAATGATGGTTTTTCTATACCAACTCACCCTTATGGATTTGACCAATGGAATTTCTCAGAGGAAGAAAATAAAGATGTTGAACTTTCACAGTTTCTCTTTGCAGCAGCTGAAAAAGTAAGTTTTCAACAATTTGAACGTGCAAAAAAATTGCTTTTTTATTGTCAATGGAATTCATCTGCAACAGGAAACTCTGTTCAAAGAATTGTCTTTCATTTTTCTCAAGCACTTTTAGAAAGAATAGAGAAAGAAACAAGAAGGTTTACAAAAGGGTCATTGAAAAATGAAGAAAGTGAGTTACTTAGGAAGATGGATTTAAATAAATCACTTTTGTGTCATATAAAAATTCCTTTTAATCAAGTGATGCAATTCATTGGAATACAAGCTATAGTGGAACATGTTGTGTATGATACTAGAATTCATCTAATAGATTTGGATATAAAAAGTGGGGTCCAATGTATAGCTTTGATGCAAGCATTGATTGAGAGACAAGATTTCATGGTTGAGATTTTTAAGGTAACTGCTGTTGGACTTAATTCATGCAAAAACAAAATTGAGGAAACAGGTAAAAACTTAGCTAGTTTTGCTGAATCTTTGAAATTACCATTTTTATATAAATGTGTTTTAGTAGAAGACATGATGGAAATTAAGGAAGTTGATTTTGAGATTGAAGAGAATGAAGCTGTTGCTGTTTACTCTCCTTATTTTCTAAGGTCTTTGATATCAAGACAAGATTGTATGGAAAATTTGATGAGGGTTTTGAGATATATAAAACCATCTATTATGATAATACTTGAAATGGAAGCAAGCCATAATTCGCCGTCTTTTGTGAACCGATTCATGGAAGCATTATTTTTCTACTCGGCTTTTTTCGATGTCGTTGAAACATGTATGAAAGAGGAGGATGATTGTAGAATGATGACAGAAGCAATATTATCTGCAGGGATAAGAAATATTGTTGGTGCAGAAGGTAGGGAAAGGAATGTTAGAAATGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAAAGTGGTTTTAGTGAGGCATGTGTTTACCAAGGTGAACTGGTGGCTAAAGAGTTTGTTTATGGGAAATTTTGTAATGTGGAAAAGAATGGGAAGTGTTTGATATTGGGATGGAAGGGGACTCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1545 0.3282 MFNDHQNQQQEFEVGNFMLEEINFDPFHQPTQQFQETITTWPKNHNHKLSSIPTKPLQNNISLSSLEILRNHGTRFMKNITNTKKTSLDNEQEKVSAEGIIRVAGTRYAQKYSSHWNDGFSIPTHPYGFDQWNFSEEENKDVELSQFLFAAAEKVSFQQFERAKKLLFYCQWNSSATGNSVQRIVFHFSQALLERIEKETRRFTKGSLKNEESELLRKMDLNKSLLCHIKIPFNQVMQFIGIQAIVEHVVYDTRIHLIDLDIKSGVQCIALMQALIERQDFMVEIFKVTAVGLNSCKNKIEETGKNLASFAESLKLPFLYKCVLVEDMMEIKEVDFEIEENEAVAVYSPYFLRSLISRQDCMENLMRVLRYIKPSIMIILEMEASHNSPSFVNRFMEALFFYSAFFDVVETCMKEEDDCRMMTEAILSAGIRNIVGAEGRERNVRNVKIDVWRRFFARYRMVESGFSEACVYQGELVAKEFVYGKFCNVEKNGKCLILGWKGTPMHSISAWRFL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02817 514 ProSiteProfiles GRAS family profile. 135 512 IPR005202 -
Car03g02817 514 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 4 512 - -
Car03g02817 514 Pfam GRAS domain family 145 512 IPR005202 -
Car03g02817 514 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 512 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02817 Car-Chr3 73580520 73582337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02817 136 513 GRAS Transcription Factor Family AT3G03450 29.974 2.75e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car03g02817 GRAS 2e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02817 - - gmx:100791952 649.818