Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02812 ATGGCTTCGGTTAAACGTCCGGCGAGTTCAGGATCCGACGGCGGAGGAGATCTACAAAATGGAACGATCGACGAGAGGAAAAGgaagaggatgatttcgaatcgcgaatcggcgagacgatcgaggatgaggaagcagaaacagTTGGAGGATCTGAGCGACGAAGTGAACAAATTACGAATCGAGAACAATAAACTGTTGGAGGACATTAAGATTAAGGAGGAAGCGTGCATTGAAAACGAAGCCACTAACGGCGTTCTCAGAGCTCAAACTATGGAATTAACGGATCGATTGCGATTTCTTAACTCGATGCTTAAATTCGCTGAAGAAGTAAGTGGATTATCCGTTGAGATACCTGAGATTCCAGATCCTCTTCTCAAACCGTGGCAGATTCCTCACCCTACACAAGCGATTATGGCGTCGGCAGATATGTTCCTGCATTGA 444 0.3941 MASVKRPASSGSDGGGDLQNGTIDERKRKRMISNRESARRSRMRKQKQLEDLSDEVNKLRIENNKLLEDIKIKEEACIENEATNGVLRAQTMELTDRLRFLNSMLKFAEEVSGLSVEIPEIPDPLLKPWQIPHPTQAIMASADMFLH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02812 147 Coils Coil 35 76 - -
Car03g02812 147 Pfam bZIP transcription factor 26 75 IPR004827 GO:0003700|GO:0006355
Car03g02812 147 MobiDBLite consensus disorder prediction 20 51 - -
Car03g02812 147 MobiDBLite consensus disorder prediction 1 51 - -
Car03g02812 147 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 145 - -
Car03g02812 147 SMART brlzneu 22 86 IPR004827 GO:0003700|GO:0006355
Car03g02812 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 29 44 IPR004827 GO:0003700|GO:0006355
Car03g02812 147 SUPERFAMILY Leucine zipper domain 26 75 IPR046347 GO:0003700|GO:0006355
Car03g02812 147 CDD bZIP_plant_GBF1 27 77 IPR045314 GO:0003700|GO:0006355
Car03g02812 147 Gene3D - 24 81 - -
Car03g02812 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 24 71 IPR004827 GO:0003700|GO:0006355
Car03g02812 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02812 Car-Chr3 73544054 73544497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02812 1 145 bZIP Transcription Factor Family AT3G62420 56.849 1.76e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g02812 bZIP_1 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02812 K25786 - gmx:778144 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02812 03 73544054 73544497 Car04g00719 04 7050237 7051405 PCT