Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02807 ATGGAAGAAGTTGTGTTGCTAGTGGATGATTTGAAGTTACTTTCTGGAACTTCTCACTGTAGAATATGTCATGAAGAAGAATTTGAAAGCTCCAAAACCTTGGAATCACCTTGTTCTTGTTCTGGAACAGTTAAGTTTGCTCATAGAGATTGCATACAAAGATGGTGCAACGAGAAAGGAAATACAACTTGTGAAATATGTCTCCAGCAATATGAACCTGGATACACAAGTCCTCCAAAGAAGTCTGAGATTAATGATGAAGCAATGTCTATTAGGGAGGAGGAAGAAGCTTCAAACGAAAGAAGAGAAAGTGAGGTGGAAGGAATTGTAATAGAAAGCGATAACTCTGAATGCAGCTCTACCGCAGATAGAAGCGCGTCTTATTGTCGATCACTGGCATTAGCTTTTACACTTGGGTTACTAGTAAGACATTTTTTTGTAGTGCTTACATGTGGAACAGAAGAGTACCCATTTACACTGTTTACTGTCATTATATTAAAGGCTTGTGGAATTATTATACCCATGTACATAGTTTATAGGACAATCGGAGCCATCCAGAATAGCATTAAACGCTATCAAGATTCTTACTACGTCACATCCCTTTCTGATGATGGAAATGAAGCACAGCACGAAGAAAATTTAATACACTAA 651 0.3779 MEEVVLLVDDLKLLSGTSHCRICHEEEFESSKTLESPCSCSGTVKFAHRDCIQRWCNEKGNTTCEICLQQYEPGYTSPPKKSEINDEAMSIREEEEASNERRESEVEGIVIESDNSECSSTADRSASYCRSLALAFTLGLLVRHFFVVLTCGTEEYPFTLFTVIILKACGIIIPMYIVYRTIGAIQNSIKRYQDSYYVTSLSDDGNEAQHEENLIH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02807 216 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 196 IPR033275 -
Car03g02807 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 77 IPR013083 -
Car03g02807 216 SUPERFAMILY RING/U-box 17 72 - -
Car03g02807 216 CDD RING_CH-C4HC3_MARCH 20 67 - -
Car03g02807 216 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Car03g02807 216 ProSiteProfiles Zinc finger RING-type profile. 20 67 IPR001841 -
Car03g02807 216 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Car03g02807 216 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 196 - -
Car03g02807 216 Pfam Protein of unknown function (DUF3675) 73 182 IPR022143 -
Car03g02807 216 SMART ringv_2 19 68 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02807 Car-Chr3 73510777 73514332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02807 20 67 C3H Transcription Factor Family AT2G37950 44.898 7.11e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02807 - - mtr:MTR_7g109460 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02807 03 73510777 73514332 Car04g00723 04 7104936 7108139 PCT