Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02801 ATGGCGCATCGAAGAGCCAAATTGTTGTTCCTTCTCTGCGCTCTCTGTTATTCTCTCCATGCCATTGCCGCAAAGAGCTATTACGATATACTTCAAGTTTCGAAAGGTGCATCGGACGACCAGATAAAGAGAGCGTACAGGAAGCTCGCTTTGAAGTACCATCCTGATAAGAATCAGGGAAATGAAGAAGCTAATAAGAAATTTGCGGAGATTAACAATGCATACGAAGTATTGTCGGATAGCGAGAAGAGAAGTATTTATGATAGGTATGGTGAAGAGGGTTTGAAGCAGCATGCTGCTGGTGGTGGAAGAGGTGGTGGAATGAACATGCAGGATATTTTTAATTCTTTCTTTGGTGGGGGATCAATGGAGGAAGAAGAAGAGAAAATTGTAAAAGGTGATGACGTGATTGTTGATTTGGATGCAACCCTTGAAGATTTGTACATGGGAGGTTCCTTGAAGGTTTGGAGAGAGAAAAATGTTGTTAAGTCAGCACCTGGGAAGAGACGCTGTAACTGTAGAAATGAGGTTTATCACAGGCAAATTGGACCTGGGATGTTTCAGCAGATGACAGAGCAGGTCTGTGACCAGTGTCCTAATGTCAAATACGTAAGGGAGGGGTATTTCATCACTGTCGATATTGAGAAAGGCATGCAAGATGGACAGGAGGTACTATTTTATGAGGATGGCGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGTTCCGTATCCGTACTGCACCTCATGAAATTTTCAGAAGGGAAGGCAGTGACTTGCACACCACTGTCACTATAACGCTGGTTCAAGCCCTTGTTGGTTTTGAGAAGACCGTTAAACATCTAGACGAACATCTAGTGGACATAAGCTCGAAGGGAATCACAAAGCCAAAGCAAGAAAGGAAGTTCAAAGGGGAGGGTATGCCACTGCATATGAGCACGAAGAAAGGTGATCTTTACGTCACTTTTGAGGTTCTATTCCCGACGTCACTGACGGATGAACAGAAAATAAAGATAAAAGATATTCTTGGTTAG 1035 0.4309 MAHRRAKLLFLLCALCYSLHAIAAKSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNQGNEEANKKFAEINNAYEVLSDSEKRSIYDRYGEEGLKQHAAGGGRGGGMNMQDIFNSFFGGGSMEEEEEKIVKGDDVIVDLDATLEDLYMGGSLKVWREKNVVKSAPGKRRCNCRNEVYHRQIGPGMFQQMTEQVCDQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHEIFRREGSDLHTTVTITLVQALVGFEKTVKHLDEHLVDISSKGITKPKQERKFKGEGMPLHMSTKKGDLYVTFEVLFPTSLTDEQKIKIKDILG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02801 344 Coils Coil 61 81 - -
Car03g02801 344 Pfam DnaJ domain 27 88 IPR001623 -
Car03g02801 344 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Car03g02801 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 131 256 IPR008971 GO:0006457|GO:0051082
Car03g02801 344 CDD DnaJ 27 80 IPR001623 -
Car03g02801 344 PANTHER BNAA09G39960D PROTEIN 8 343 - -
Car03g02801 344 Gene3D - 250 328 - -
Car03g02801 344 Gene3D DnaJ domain 23 127 IPR036869 -
Car03g02801 344 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Car03g02801 344 Gene3D - 128 249 - -
Car03g02801 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 253 336 IPR008971 GO:0006457|GO:0051082
Car03g02801 344 SUPERFAMILY Chaperone J-domain 23 122 IPR036869 -
Car03g02801 344 SMART dnaj_3 25 83 IPR001623 -
Car03g02801 344 CDD DnaJ_C 134 331 - -
Car03g02801 344 PRINTS DnaJ domain signature 28 46 IPR001623 -
Car03g02801 344 PRINTS DnaJ domain signature 46 61 IPR001623 -
Car03g02801 344 PRINTS DnaJ domain signature 63 83 IPR001623 -
Car03g02801 344 PRINTS DnaJ domain signature 83 102 IPR001623 -
Car03g02801 344 Pfam DnaJ C terminal domain 138 328 IPR002939 -
Car03g02801 344 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 343 IPR044713 GO:0006457|GO:0030544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02801 Car-Chr3 73444649 73450058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02801 25 90 C2H2 Transcription Factor Family AT1G74250 42.254 4.25e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02801 K09517 - gmx:100807885 604.749