Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02785 ATGCACAACGGGAAAACATCACCCTTGTTGGCTCTCATATCTTTTGTTCTACTCTTTTCACTCACCAATTCCTCAAATTTACCAACTACACCCCCCCAAACAAAAACACACCTCCAAGTAGCCCATTCAACATGCCAAGGAACACTCTACCCAAACCTTTGTGTCTCAACCTTATCCACTTTCCAAGATCTTGCCTCAAAATCAGTCCCACAAATTATTTGTTCCACCCTCAACTCTACCATAAACGAAGTTAAATCATCATCTTTCAATTGCACTAGACTAAAAAAACGTCCAAGTCTTCATCCATATGACCAAAGAGCCCTTGATGATTGTCTCAATTTATTCGACAACACAATTGAAGAACTCAAATCCACCATTAACGATCTCTCTCAAACAAAAATAACTTCAAAGCCTTATCATAATTGTCAAACTCTACTAAGTGGTGCAATGACCAATGTTTACACGTGTTTGGATGGATTTGCTTATAGTAAAACGAATTTGAGACACAAAATTGAGAAAAAGTTGTATAAAATTTCAAATCATGTTAGTAACTCACTTGCTTTGTTGATGAAAGTTCCTGGAGTGAAGAATAAAAGTTCGGAGTCAGAGGCTTTCCCTGAATATGGTGAGGTGAATGGCGGGTTTCCTTCATGGATAACCCGTAAAGATAGGAAGCTACTTCAAGCTGCGGTTAGTGAGACTCATTTCAATCTTGTGGTTGCTAAAGATGGTACCGGCAACTTTTCTACTATAGGAGAAGCATTGGCTGCAGCTCCAAACTCAAGCACAACAAGGTTTGTGATACACATAAAAGAGGGGGCCTACTTTGAGAATGTGGAAGTGATAAAGAAGAAAATTAATTTGATGTTAGTTGGAGATGGGATTGGAAAGACTGTTGTGAAGGCCAGTAGAAATGTTATAGATGGGTGGACCACTTTTCAATCAGCTACTTTTGCTGTAGTGGGAAGCAATTTCATAGCAAAGGGCATAACCTTTGAGAACTCAGCCGGGCCAAGCAAACACCAAGCAGTGGCAGTAAGGAGTGGTGCGGACTTTTCAGCCTTCTACAATTGCAGCTTCGTTGCATACCAAGACACTCTCTATGTCCACTCTCTTCGTCAATTCTACCGTGAATGCGACATTTATGGCACTGTAGACTTCATCTTTGGCAATGCAGCAGTTGTCTTCCAAAACTGCAACTTATATGCACGCAAACCCGATCCAAATCAACAAAACTTGTTCACCGCACAAGGTAGACAAGATCCTAACCAGAACACCGGCATTTCGATCATAAACAGTAAAATTGCGGCTGCTGCGGATTTGATTCCGGTAAAATCATCGTTCAAGAGTTACCTCGGTCGTCCTTGGAAACAATATTCAAGAACTGTTTATCTTCAATCTTTGATTGAAGATTTGATTGATCCAGCAGGATGGTTGCCATGGAATGGAACATTTGCATTGGATACATTGTATTATGGTGAGTATAAGAATAGAGGTCCTGGTTCAAACACAAGTGCTAGAGTTACTTGGCCAGGTTATAGAGTTATCACTAACACCACTGAGGCAAGTCAATTCACTGTTAGAAATTTCATTCAAGGCAATGATTGGTTGAACTCTACTGGAATTCCATTTTTCCCTGATTTGAGTTGA 1650 0.4024 MHNGKTSPLLALISFVLLFSLTNSSNLPTTPPQTKTHLQVAHSTCQGTLYPNLCVSTLSTFQDLASKSVPQIICSTLNSTINEVKSSSFNCTRLKKRPSLHPYDQRALDDCLNLFDNTIEELKSTINDLSQTKITSKPYHNCQTLLSGAMTNVYTCLDGFAYSKTNLRHKIEKKLYKISNHVSNSLALLMKVPGVKNKSSESEAFPEYGEVNGGFPSWITRKDRKLLQAAVSETHFNLVVAKDGTGNFSTIGEALAAAPNSSTTRFVIHIKEGAYFENVEVIKKKINLMLVGDGIGKTVVKASRNVIDGWTTFQSATFAVVGSNFIAKGITFENSAGPSKHQAVAVRSGADFSAFYNCSFVAYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPDPNQQNLFTAQGRQDPNQNTGISIINSKIAAAADLIPVKSSFKSYLGRPWKQYSRTVYLQSLIEDLIDPAGWLPWNGTFALDTLYYGEYKNRGPGSNTSARVTWPGYRVITNTTEASQFTVRNFIQGNDWLNSTGIPFFPDLS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02785 549 Gene3D - 231 548 IPR012334 -
Car03g02785 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 189 IPR035513 -
Car03g02785 549 SMART PMEI_2 36 188 IPR006501 GO:0004857
Car03g02785 549 PANTHER PECTINESTERASE 15 545 - -
Car03g02785 549 PANTHER PECTINESTERASE 15 545 - -
Car03g02785 549 Pfam Pectinesterase 237 534 IPR000070 GO:0030599|GO:0042545
Car03g02785 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 189 IPR006501 GO:0004857
Car03g02785 549 SUPERFAMILY Pectin lyase-like 235 546 IPR011050 -
Car03g02785 549 CDD PMEI-like_3 43 194 - -
Car03g02785 549 Coils Coil 112 132 - -
Car03g02785 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 192 IPR035513 -
Car03g02785 549 Pfam Plant invertase/pectin methylesterase inhibitor 42 188 IPR006501 GO:0004857
Car03g02785 549 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02785 Car-Chr3 73317418 73323866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02785 65 548 Carbohydrate Esterase AT4G02320 54.819 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02785 K01051 - gmx:100802881 825.854