Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02784 ATGGCTTTCAAGAATTTTTCCATTCTTACTCTCTTCATTTTTCTTTTCATTTCCATCTTGATATCTTTTCCACTATCATCCCTAGCTGATAATTCCAACGTTCCACCACAAAAAATTTGCGAGGACACCTTAGATCCTCCTTTTTGTAAAACTTTGTTTTCTATTGAAAATGGAACCATATTTGATTATGGCCGTTTCTCAATAAAAAAATCCTTATCACAATCACGAAAATTCTTAAACTTAGTACTTTCACAACTTCAAAATAAATCATCTTTGTCACAACCCACAATTTCCGCTCTCAAAGATTGTCAATTCCTTGCACAACAAAATTTCGAATATTTATCAAACACCAATCACTCTACGCATAATACTAACGATGTTCTTTCCGTTTCTCAAGGTGAAGAATTTCAAACATTGCTTAGTGCCGTTTTAACAAACCAAGAAACTTGCTTAGATGGTTTAATAACCATAGCTTCGGATCAAAAAGTGATTGATGATTTTTCATCAATACTTTTGAATGATACAAAGCTTCATAGTGTGTCACTTGCTTTATTTTTGAAGGGTTGGGTTCCTAACATTAAAAAACAAACATCATGGCCAAGAAATGGAAGACATTTGGATTTTCACAACGGTCGTTTACCGTTGAATATGTCAAAAGGAGTAAAAGCTCTTTATGATTCAGCTAGAGCACATGGAAGAAAATTACTTCAAACAATTGATGAAAGTGTTACTATAAGTGATATTGTAATTGTTAGTCAAGATGGAAGTGGAAATTTTACGAATATTACTGATGCTATAAGAGTTGCACCAAATAACACGGTTTCTAGTATTAATGGTTACTTTCTTATTTTTGTTACCGAGGGTGTGTATCAAGAATATGTATCTATACCAAAAAATAAGAAGTATTTGATGATGGTTGGAGATGGAATCAATCGAACAATTATCACGGGTGATCATAACGTTGTTGATGGTTCTACAACATTTAACTCGGCAACATTTGCTGTAGTGGCAGAAGGGTTCATAGCAGTGAACATGACAATCCGCAACACTGCTGGAGCAAGCAAACACCAAGCAGTTGCATTAAGAAACGGAGCTGATTTATCCACCTTCTATAGCTGCAGCTTCGAAGGGTATCAAGACACTTTATATACACATTCTATGAGACAATTTTATCGCGAATGTGATATTTATGGCACAGTTGATTTCATATTTGGAAACGCTTTAGTTGTTTTCCAAAATTGTAACATTTATCCTCGTCTTCCATCAAGTGGACAGTTCAATGCTATTACTGCTCAAGGTCGAACTGATCCAAATCAAAACACAGGAATTTCCATACATAATGCAACTATTAAACCTTCCGATGATTTGGCTCCTGTAATTGGCACCGTCAACACATACCTTGGTAGGCCATGGAAAGAATATTCAAGGACAGTCTATTTGCAGTGTTTTATGGATAGTTTCATAAGTCCTTCTGGTTGGCGTGAATGGAGTGGAGATTTTGCTTTAAGCACTTTGTATTATGCAGAGTATAATAATACAGGAGTTGGTTCAGATACAAGCATGAGAGTTAATTGGGTTGGTTATCATGTTATTATTAATGCTACTGATGCTGCTAATTTTACCGTCTCTAATTTTTTGGATGGAGATAGTTGGTTGCCTCAAACTGGAGTTCCTTACTTTAGTGGATTGATATAA 1695 0.351 MAFKNFSILTLFIFLFISILISFPLSSLADNSNVPPQKICEDTLDPPFCKTLFSIENGTIFDYGRFSIKKSLSQSRKFLNLVLSQLQNKSSLSQPTISALKDCQFLAQQNFEYLSNTNHSTHNTNDVLSVSQGEEFQTLLSAVLTNQETCLDGLITIASDQKVIDDFSSILLNDTKLHSVSLALFLKGWVPNIKKQTSWPRNGRHLDFHNGRLPLNMSKGVKALYDSARAHGRKLLQTIDESVTISDIVIVSQDGSGNFTNITDAIRVAPNNTVSSINGYFLIFVTEGVYQEYVSIPKNKKYLMMVGDGINRTIITGDHNVVDGSTTFNSATFAVVAEGFIAVNMTIRNTAGASKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNALVVFQNCNIYPRLPSSGQFNAITAQGRTDPNQNTGISIHNATIKPSDDLAPVIGTVNTYLGRPWKEYSRTVYLQCFMDSFISPSGWREWSGDFALSTLYYAEYNNTGVGSDTSMRVNWVGYHVIINATDAANFTVSNFLDGDSWLPQTGVPYFSGLI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02784 564 CDD PMEI-like_3 39 189 - -
Car03g02784 564 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Car03g02784 564 SUPERFAMILY Pectin lyase-like 244 562 IPR011050 -
Car03g02784 564 SMART PMEI_2 31 184 IPR006501 GO:0004857
Car03g02784 564 Pfam Pectinesterase 249 549 IPR000070 GO:0030599|GO:0042545
Car03g02784 564 Pfam Plant invertase/pectin methylesterase inhibitor 37 183 IPR006501 GO:0004857
Car03g02784 564 Gene3D - 242 563 IPR012334 -
Car03g02784 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 185 IPR035513 -
Car03g02784 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 187 IPR035513 -
Car03g02784 564 PANTHER PECTINESTERASE 19 563 - -
Car03g02784 564 PANTHER PECTINESTERASE 19 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02784 Car-Chr3 73306819 73309109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02784 8 564 Carbohydrate Esterase AT4G02330 58.722 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02784 K01051 - gmx:100786124 810.831