Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02781 ATGGCTTCAGACCCAGACCCAGACCTTGCAGCTAAGTATGCTCGTAACGGCAAAGTCTTGGTAGCCTCTTCCATTCTTCTCTTCATACTCGTACTCATCATCGTTCTTTTTCGCACTTACGTTTACCTTTGCCACCGTTACCATCACCGTCGCCGTCAACGCCCTCTTACCACCACTTTCAACGAACAAAAACTTGATCCTTCCATTCTCAAATCCCTTCCTTCCTTCACTTACTCTTCCTCCGCCGCACGCCGTACTCTCCACGACTGCGCCGTCTGCTTGTCGGAGTTCATCGACGGAGATGAATGCCGTACGCTTCCTAACTGTAACCACGATTTCCATTCTGATTGCATTGACACGTGGCTCGCTTCTCACTCTAATTGTCCTCTCTGCCGTGCTCTGGTCCGACCGGAATCTCACATTGAATGGTCCGATATTTCGGGTTTCGAACCGGGTGAGGGTTGCTCTTATTTTCCTGAACCGATTGGGTGTCCGAGAAAACAATTGAATTTAAATCTAAGTGTAACTGTAGAGTAA 537 0.4842 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLSVTVE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02781 178 SUPERFAMILY RING/U-box 70 137 - -
Car03g02781 178 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 10 141 - -
Car03g02781 178 PANTHER RING-H2 FINGER PROTEIN ATL64 10 141 - -
Car03g02781 178 Pfam Ring finger domain 89 132 IPR001841 -
Car03g02781 178 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Car03g02781 178 SMART ring_2 90 131 IPR001841 -
Car03g02781 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 137 IPR013083 -
Car03g02781 178 CDD RING-H2_PA-TM-RING 89 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02781 Car-Chr3 73291589 73292639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02781 13 142 Rapid Response to Elicitors AT3G16720 35.570 2.54e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02781 - - cam:101488632 360.533