Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02779 ATGGGTATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACCAAAAGAACCGCACCCAAATCCAATGATATCTACCTTAAGCTTCTCGTTAAGCTTTACCGTTTCCTTGTTCGGAGGACTGAAAGTAGTTTCAATGCTGTTATCCTCAAGCGTCTCTTCATGAGCAAAGTCAACAAGCCACCACTATCCCTCTCTAGGTTGATTCGCTTCATGAAGGGAAAGGAGGGTAAGATAGCTGTAGTTGTTGGAGCTGTGACAGATGACATTAGGGTTTATGAAGTTCCTGCAATTAAGGTAACTGCTCTAAGGTTCACAGAAACTGCCAGAGCTAGAATTGAGAAGGCTGGTGGGGAGTGCCTCACATTTGATCAGCTTGCTCTTAGAGCTCCATTGGGCCAGAACACGGTTCTTCTTAGAGGTCCTAAAAATGCTCGTGAGGCTGTCAAGCACTTTGGACCAGCTCCTGGTGTGCCACACAGCCACACCAAGCCCTATGTGCGCTCTAAGGGCCGGAAATTTGAGAAGGCAAGAGGAAGACGAAAGAGCAGAGGCTTTAGAGTTTGA 564 0.4699 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESSFNAVILKRLFMSKVNKPPLSLSRLIRFMKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02779 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Car03g02779 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Car03g02779 187 Gene3D - 1 187 - -
Car03g02779 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Car03g02779 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02779 Car-Chr3 73277071 73279291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02779 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 80.108 1.72e-107 304