Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02772 ATGACCATTACATTTCCCCTTATGTCACTATTAGTATTTTTCACATTCCTTTCACTCTCaacaaacacaaatcaaatgacatatgcaaaagaaaacaacaacaacaacaacaaTGTTAAGGAAGCTTGTAGTGTGACAAGGTACAAAAACTTATGCTTCCACACACTCTCACAATTCTCCAACACAGCAGGAAGAAATCCAAGCAAATGGGCACGTGCAGGGGTGTCAGTAGCAATAGGGGAGGTTATAAATGTTCAACAATATCTTACAACATTAAAACGTTACGGGAACATGAAAGGAAGAAACAGAGTTGCGCTTTTGGATTGTATTGAAACTTTTGATTATGCAGCTGATGAGCTTCATAGATCACTTGTTGTGCTTAGGAAGCTAAGCAAAAGCACGTTTAGTACACAATTGGGGGATATTAATACATGGATTAGTGCAGCACTTAGTGATGAAGATACTTGTATTGATGGATTTGAAGGGAACAATGAAAGGGAAATTAAATTTTTGCAACATAAGGTTCAAAATGTGTCTTGCATAACTAGTAATGCTCTTGCTCTTGTTAATAAGCTTGCTGCTATGGGTATTGGAAGTATCATTGATCCACAGAACTTCTCGGATTAA 627 0.3429 MTITFPLMSLLVFFTFLSLSTNTNQMTYAKENNNNNNNVKEACSVTRYKNLCFHTLSQFSNTAGRNPSKWARAGVSVAIGEVINVQQYLTTLKRYGNMKGRNRVALLDCIETFDYAADELHRSLVVLRKLSKSTFSTQLGDINTWISAALSDEDTCIDGFEGNNEREIKFLQHKVQNVSCITSNALALVNKLAAMGIGSIIDPQNFSD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02772 208 CDD PMEI-like_3 42 194 - -
Car03g02772 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 187 - -
Car03g02772 208 SMART PMEI_2 34 188 IPR006501 GO:0004857
Car03g02772 208 Pfam Plant invertase/pectin methylesterase inhibitor 38 188 IPR006501 GO:0004857
Car03g02772 208 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 17 187 - -
Car03g02772 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Car03g02772 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 194 IPR035513 -
Car03g02772 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02772 Car-Chr3 73222403 73223465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02772 7 193 Carbohydrate Esterase AT3G05610 27.225 3.38e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02772 - - gmx:100791264 249.21