Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02752 ATGAAGAGGAAAACCCCTAAAAATGTAAAACAAAGTGGAAGGAAGAAGGTATCATCGCTGGGCGTTAACAACACGAGACAGTTACAGCTTCAACTGAACGAAGTCTCTCGTCTGTCTCTCAaacaatacaaaccattaccaacaacaacaacaatCTGTACTTCTTCTTCAACCGCTTCTCGCTTCCAGAACCTTCTAGATTCTGAGACCAACGAAAACCCTCACGCTAGGGTTACGGGTGATGCTGTTGAACCAGATTACAGAGATTTCATTCTCAGCCAAGAATTCTTTTGCACACCAGATTACATAACTCCGGATAATCAACGAATTTTGAACAGCTTGGATTTCAACAAGGATAATAGTCCTTGCCCAAAATCGCCGGAGAAATTGAATACTACGAAAAGCAAGAGATGCACATTGGATGGTATCTTGGTAAACCCTCTCAGCCCCACCTTTTCTGGCAACCACCAACCAGTTGTGGAACTTGATAAGGACTCTGTTGCAGAGGAAGTAGATATTGATAAAACAATGGCAGCCAGTAAGCCAAAGGCCCAGAATTATGTGTCACATTCTGCAGCAGCATTGCGTTGTAGGGTCATGCCTCCTCCTTGCATTAGCAACCCCTATTTAAAAGACGTTTCACAACAAGAGACAGATCCCTTCGCAAACCAAAGATCCAAATGTGCAGGTCTCTTCCCTAATTTTACTTCTGCTGATGGGCTCTCACGCTATCGCACAGATTTTCATGAGATTGAGCAAATTGGCAGAGGGAACTTCAACAGTGTTTTCAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCTGTGAAACTCAGTACTAGACAGTTGCACCAGGAAACTGAAAGGCGAAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCTTGGGGTCTCATGAGAACATTGTGGGGTATTATTCTTCATGGTTTGAAAACGAACAGCTGTACATTCAGATGGAGCTATGTGATCATAGCTTATCTATAAACAAAGGCTACGAGTTATTAGCAGAAGGACAAGCATTAGAAGTTTTATATCAGGTTGCCAACGCACTGCAATTTATACACGAGAAGGGAGTAGCTCATCTTGATGTTAAACCTGATAATATTTATGTAAAAAATAGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTTATTGATAATAGCCTGCCAATTGAAGAGGGAGATGCTCGTTATATGCCCCAGGAAGTTCTAAACGAGAATTATGATCACCTTGACAAGGTTGATATTTTCTCCCTGGGAGCTTCTATTTATGAACTCATTCGAAGACTGCCTTTGCCAGAATCAGGAAGTCATTTTTTAAATCTTAAAGAGGGCAAGTTGCCACTACTACCTGGTCATTCATTGCAATTTCAAAACTTGCTTAAGGCCATGATGGATCCTGATCCGGTTAAGAGACCTTCGGCTAGAGAGTTAGTAGAGAACCCAATTTTCGACAAGGCCTTAAGAATACCAAAAAATTGA 1506 0.4064 MKRKTPKNVKQSGRKKVSSLGVNNTRQLQLQLNEVSRLSLKQYKPLPTTTTICTSSSTASRFQNLLDSETNENPHARVTGDAVEPDYRDFILSQEFFCTPDYITPDNQRILNSLDFNKDNSPCPKSPEKLNTTKSKRCTLDGILVNPLSPTFSGNHQPVVELDKDSVAEEVDIDKTMAASKPKAQNYVSHSAAALRCRVMPPPCISNPYLKDVSQQETDPFANQRSKCAGLFPNFTSADGLSRYRTDFHEIEQIGRGNFNSVFKVLKRIDGCLYAVKLSTRQLHQETERRKALMEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDHSLSINKGYELLAEGQALEVLYQVANALQFIHEKGVAHLDVKPDNIYVKNSVYKLGDFGCATLIDNSLPIEEGDARYMPQEVLNENYDHLDKVDIFSLGASIYELIRRLPLPESGSHFLNLKEGKLPLLPGHSLQFQNLLKAMMDPDPVKRPSARELVENPIFDKALRIPKN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02752 501 Gene3D Phosphorylase Kinase; domain 1 237 326 - -
Car03g02752 501 SMART serkin_6 248 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02752 501 ProSiteProfiles Protein kinase domain profile. 248 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02752 501 MobiDBLite consensus disorder prediction 1 22 - -
Car03g02752 501 Pfam Protein kinase domain 248 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02752 501 Gene3D Transferase(Phosphotransferase) domain 1 327 497 - -
Car03g02752 501 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 87 406 - -
Car03g02752 501 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 419 494 - -
Car03g02752 501 SUPERFAMILY Protein kinase-like (PK-like) 239 494 IPR011009 -
Car03g02752 501 PANTHER BNAA08G27310D PROTEIN 87 406 - -
Car03g02752 501 PANTHER BNAA08G27310D PROTEIN 419 494 - -
Car03g02752 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02752 Car-Chr3 73110425 73115021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02752 2 494 Core Cell Cycle Gene Families AT1G02970 58.266 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Car03g02752 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02752 K06632 - gmx:547742 720.694