Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02750 ATGTCAAATATTTCAGGTGATGAAGGAAGCTTCTCCTCAGGAAACAATGGAGAAGAAGTTTATCAAGAAAGCAAACAGCAACAGCTGCAAAATCATCTTAATAATGAATCAAGTTCAGGACCTTCTGGTGCTTGTAATAGCAATGGCTCCACTAATCAACAACAAAACAAGAAGAAAAGAAACCTCCCTGGAACACCAGATCCTACTGCTGAAGTTGTTGCATTATCACCAACAACCTTAATGGCAACAAATAGATTTGTCTGTGAGATATGCAACAAAGGATTTCAAAGGGACCAGAATCTTCAGTTACATCGCAGAGGTCACAATCTTCCATGGAAACTGAGGCAAAGAACAAGCACAGAGGTGAAGAAAAAGGTGTATGTGTGCCCTGAACCATCATGTGTACACCATAACCCAGCTCGTGCATTAGGAGACCTAACTGGCATCAAAAAGCATTTTAGCCGCAAACATGGTGAGAAGAAATGGAAATGTGACAAGTGCTCTAAAAGATATGCTGTTCAATCTGACTGGAAGGCACACCAGAAAACATGTGGTACTAGGGAATATAAATGTGATTGTGGAACCATATTTTCTAGGAGAGATAGTTTTATAACCCACAGAGCTTTCTGTGATGCATTAACAGAAGAAAACAACAGAGTGAACCAAGGATTAACAAGTGGCATGCCACCAAATTTACAGAATCAAATGCCAGATCATATGTCAACTATGCCTCTAAAACCATGTTCCAACACACCATCAGAATTAAACAATGACTATGACCCTAAAAACTCACTAAGATCACCACCACAAGAACTTGTTCCAACAATACCATTCAGATCAACCAACAATGCATGTGGTGGCATGTTCTCCACCACTTCAGGTGCACTCTTTGGTGGTCCAAAAGCCTTAACACCCACTTCTTCAAGCCTTCAACTAAGTTCCAATAGCTTCAATTACTTCCATGACAGCAAAAATGGTTCAGCTCAAATGTCTGCTACAGCTTTATTACAGAAAGCAGCTCAAATGGGAGCTACTGCAAGCAATAGTGGTAACTCTTCCATGATGCAAAAAAGCTTTGTTAGTAGCATGGTTGGTCCTGATCATGTTTCAGCTTCTGCTAGACCACCATACTCTAGTTCTTCCATCATGATGCAGCATAACATGCCCTCTTATGAACACTTTGATTTATCTAACATGACTAATGTTAGTGGTGGTGGAGCATTCACTAATCAATTGTTTCAAAAAGAACAACATGAAATTTCAGTACTATTTGATAATAACAATAGTACTAGTGTTTCTACAATGAATAATGATATAGGACTGTTCAACCAAATATCCATGAGAAATGATGTGGCAGGGAATGATATGACAAGAGTTCATGATTTCTTGGGAATTGGAGGTTCAAATTCAAGTTTGCATGAACCAGTATTAAGTCAACAGAGGTTGGAGATTATGAATAATTTTCATCACCATCTTCCACATGAGGATTCAGCTATAGAGAAATCTATTTGGGATGTTTGA 1521 0.3879 MSNISGDEGSFSSGNNGEEVYQESKQQQLQNHLNNESSSGPSGACNSNGSTNQQQNKKKRNLPGTPDPTAEVVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSTEVKKKVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRVNQGLTSGMPPNLQNQMPDHMSTMPLKPCSNTPSELNNDYDPKNSLRSPPQELVPTIPFRSTNNACGGMFSTTSGALFGGPKALTPTSSSLQLSSNSFNYFHDSKNGSAQMSATALLQKAAQMGATASNSGNSSMMQKSFVSSMVGPDHVSASARPPYSSSSIMMQHNMPSYEHFDLSNMTNVSGGGAFTNQLFQKEQHEISVLFDNNNSTSVSTMNNDIGLFNQISMRNDVAGNDMTRVHDFLGIGGSNSSLHEPVLSQQRLEIMNNFHHHLPHEDSAIEKSIWDV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02750 506 SMART c2h2final6 86 108 IPR013087 -
Car03g02750 506 SMART c2h2final6 127 157 IPR013087 -
Car03g02750 506 SMART c2h2final6 162 182 IPR013087 -
Car03g02750 506 MobiDBLite consensus disorder prediction 1 62 - -
Car03g02750 506 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 487 - -
Car03g02750 506 Pfam Zinc finger, C2H2 type 86 108 IPR013087 -
Car03g02750 506 Gene3D Classic Zinc Finger 140 220 - -
Car03g02750 506 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 487 - -
Car03g02750 506 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Car03g02750 506 Gene3D Classic Zinc Finger 64 132 - -
Car03g02750 506 SUPERFAMILY beta-beta-alpha zinc fingers 85 183 IPR036236 -
Car03g02750 506 MobiDBLite consensus disorder prediction 1 71 - -
Car03g02750 506 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02750 Car-Chr3 73078724 73081779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02750 57 362 IDZ Gene Family AT3G50700 56.716 6.26e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car03g02750 zf-C2H2 0.0051 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02750 - - cam:101505978 1032.32