Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02735 ATGGGTGGTTCAAACAAAAATGAACAAGAATCACCACAAAAAACTCGACCCTGTGATTATTGTAACAACTCAACAGCACTTCTGTATTGCAGAGCAGATTCAGCAAAACTCTGTTTCTCATGTGACCGTGAAGTTCACTCAACAAACCAACTTTTCTCCAAACACACACGCTCTTTAATCTGCGATTCATGCAATGATTCACCTGCAACTATACTCTGTTCAACTGAATCCTCTGTTTTCTGTCAGAACTGTGACTGGGAAAATCATAATATTTCACTCTCTTCGCCACATGAAAGAAGACCACTTGAGGGGTTTAATGGGTGCCCTTCTGTTAATGAACTTTTGTCGATTGTTGGGTTGCATGATGTTGAGAAAAAATCGTTGCTTTTGAGTGAGGAAAGTGTTGCAGATGGGTTTTTGAGTTGTGAGATTGATGGGTTTAGTGATGATTTGTTTGTTTGGGATGCTCCTTCTTTTGTTAGTTTTGATGATCTTATTTCTACTTCTCATAGTTATAGTGCTATGGAGGTTCCTCCTTTGCCCAAGAATCGCAAGGCAGCTTGTGGGAGACATCAAGAAGAGATTTTAAATCAGCTTCGCGAGATGGTAAAGTCTGAGCCATTGGATCCTGAAGAGTATATGCAACCGAAAAATTTATCGACAGGTTTTGAACATGATACAAAGGATGATATTATTCCTTCAAATGAGTGGCTCGGAGAAAGTGGTGAGCCTGTGTATCAAGTTGTTCCTGTTGATACGTCATTCAAAGCTCATACCAAAGAAATTCCGGTTAAACACGCTGTACCTTCTGCTGAGGAGCCTCATAGCCATAGTAACAATGGAGGGACACCTTCAGAGTCTCTTAAGTCTGAAACTTTGTCAACTACTCCAAGAGCCGTGCCAGCTCCATATGAGTTAGCGAGTCAAGAAAGGGATTCTGCATTACTACGGTACAAGCAAAAGAAGAAAACAAGAAGATACGACAAGCATATAAGATATGAATCACGTAAAGTTCGGGCAGAGAGCAGGACAAGAGTTAGAGGGCGATTTGCCAAGATAGAACACTGA 1068 0.4092 MGGSNKNEQESPQKTRPCDYCNNSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRSLICDSCNDSPATILCSTESSVFCQNCDWENHNISLSSPHERRPLEGFNGCPSVNELLSIVGLHDVEKKSLLLSEESVADGFLSCEIDGFSDDLFVWDAPSFVSFDDLISTSHSYSAMEVPPLPKNRKAACGRHQEEILNQLREMVKSEPLDPEEYMQPKNLSTGFEHDTKDDIIPSNEWLGESGEPVYQVVPVDTSFKAHTKEIPVKHAVPSAEEPHSHSNNGGTPSESLKSETLSTTPRAVPAPYELASQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVRGRFAKIEH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02735 355 MobiDBLite consensus disorder prediction 267 331 - -
Car03g02735 355 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Car03g02735 355 Pfam CCT motif 311 352 IPR010402 GO:0005515
Car03g02735 355 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 13 13 355 - -
Car03g02735 355 ProSiteProfiles Zinc finger B-box type profile. 56 102 IPR000315 GO:0008270
Car03g02735 355 SMART bboxneu5 61 102 IPR000315 GO:0008270
Car03g02735 355 SMART bboxneu5 13 60 IPR000315 GO:0008270
Car03g02735 355 CDD Bbox1_BBX-like 17 60 - -
Car03g02735 355 Pfam B-box zinc finger 59 102 IPR000315 GO:0008270
Car03g02735 355 Pfam B-box zinc finger 14 58 IPR000315 GO:0008270
Car03g02735 355 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 355 - -
Car03g02735 355 CDD Bbox1_BBX-like 60 102 - -
Car03g02735 355 ProSiteProfiles CCT domain profile. 311 353 IPR010402 GO:0005515
Car03g02735 355 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02735 Car-Chr3 72950218 72953813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02735 9 326 C2C2-CO-like Transcription Factor Family AT2G47890 40.351 2.25e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Car03g02735 zf-B_box 4.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02735 - - mtr:MTR_7g108150 573.548