Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02697 ATGCTGAGTTTCAGGATGAGAAACTTGTTGTCCCGTGTCAAAACAAAGACAAAGAAACCCATCAGAAACAAAAACTCTCACAAACTCAGAAACCAAAACCACATTTCCATTAAAAAATATTCTCCATTTCCTATAGAAGAAGATGATACCGAAGAAGGTTTCAGCATCAAAACCTCTGCACCATCACATACTCATGGAGTTCAGCCCTTGGGAAATCTCTACCTCAACCCAGGTTCCATCAATTCCAGAGACACTGGTTTAGGTAATCTTCATACACTCACTGATGAACTTGTTCTTGAAATTCTAGGGTTTTTGGATGGTACAAATTTGGGGGTTTTGGCCTCTGTTAGTAAATCGTTTTATGTTTTCACCAATCATGAACCCCTTTGGAGGAATCTTGTATTGGAGAATCTTTTTGGTGGGTTTCAGTATAATGGGTCATGGAAATCTACTTTTGTTTCTGCTTGTTACCCTTCATTTGATATTTCAAGTAGTGATGTTAGGAGTTTCAAAGTTAGGGACTTTTATTCTGATTATCTTTTCCAGAGTTGGCTATGTGCTAATCTTGAAATGAAACCTGAGTGGTTGGAGAGGGATAATATAGTTCGAAAGAAGGGAATTTCGGTTGAAGAATTTGTGGTGAATTTTGAGGAGTTCAATAAGCCGGTGTTGTTGGAAGGGTGTATTGATAATTGGGATGCATTGAGGAATTGGGATAGAGATTATTTGGTGCAGTTATGTGGTGATGATGTTAAGTTTGCGGTTGGGCCGGTGGAGATGACGCTTGGAGATTATTTTGGATACTCGGATCAAGTTAGAGAAGAAAGACCGATGTATCTGTTTGATCCAAATTTTGCCGAAAAAGTTCCAAAATTGGGTTCTGAATATGAAGTTCCGGTGTATTTTCGGGAGGACTTGTTTGGTGTTTTGGGTGATGAGAGACCTGACTATCGGTGGATTATTATTGGACCAGCTGGGTCTGGATCGTCATTCCATGTTGATCCAAATTCAACTTCGGCTTGGAATGCTGTGATCAAGGGGTCTAAGAAATGGGTATTGTTTCCTCCCGATGTAATTCCGCCCGGTGTTCATCCTAGTCCTGATGGTGCGGATGTTGCATCTCCTGTTTCAATAATTGAATGGTTCATGAACTTTTACGGTGCAACGAAGAATTGGAAAAAGAAGCCAATTGAGTGCATATGTAAAGCTGGAGAGGTTATCTTTGTGCCTAATGGATGGTGGCATTTGGTGATCAACTTGGAGGAATCAATTGCCATAACGCAAAACTATGTTAGTAGGAGAAATTTGGTAAATGTGTTGGATTTTCTTAAAAGGCCAAATGCAAGCACACTGGTCTCTGGAACAAAGGATAGAGTAAATTTGTATGATAAGTTCAAGAATGCTATTGAGGCTTCTTTTCCTGGAGAAATTGATGAACTGACCCAAAAAGAAGAAGAGAAAAAAATCCAGCAAAGGAAACTTTCCTTCTGGGATTCTGTTGCAGATGCCAATGTGGGAGCTTTCAAGTTCTCATTCTAG 1539 0.3977 MLSFRMRNLLSRVKTKTKKPIRNKNSHKLRNQNHISIKKYSPFPIEEDDTEEGFSIKTSAPSHTHGVQPLGNLYLNPGSINSRDTGLGNLHTLTDELVLEILGFLDGTNLGVLASVSKSFYVFTNHEPLWRNLVLENLFGGFQYNGSWKSTFVSACYPSFDISSSDVRSFKVRDFYSDYLFQSWLCANLEMKPEWLERDNIVRKKGISVEEFVVNFEEFNKPVLLEGCIDNWDALRNWDRDYLVQLCGDDVKFAVGPVEMTLGDYFGYSDQVREERPMYLFDPNFAEKVPKLGSEYEVPVYFREDLFGVLGDERPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVIKGSKKWVLFPPDVIPPGVHPSPDGADVASPVSIIEWFMNFYGATKNWKKKPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVSRRNLVNVLDFLKRPNASTLVSGTKDRVNLYDKFKNAIEASFPGEIDELTQKEEEKKIQQRKLSFWDSVADANVGAFKFSF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02697 512 PANTHER AND JMJC DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G08170)-RELATED 57 510 - -
Car03g02697 512 SUPERFAMILY Clavaminate synthase-like 203 445 - -
Car03g02697 512 Gene3D Cupin 167 432 - -
Car03g02697 512 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 57 510 - -
Car03g02697 512 SUPERFAMILY F-box domain 85 154 IPR036047 GO:0005515
Car03g02697 512 Pfam Cupin-like domain 211 430 IPR041667 -
Car03g02697 512 Gene3D - 83 159 - -
Car03g02697 512 ProSiteProfiles JmjC domain profile. 287 447 IPR003347 -
Car03g02697 512 SMART cupin_9 278 447 IPR003347 -
Car03g02697 512 SMART fbox_2 93 133 IPR001810 GO:0005515
Car03g02697 512 ProSiteProfiles F-box domain profile. 87 133 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02697 Car-Chr3 72666743 72669655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02697 78 436 Glycosyltransferase AT1G78280 37.500 3.04e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Car03g02697 Cupin_8 2e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02697 - - gmx:100782241 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02697 03 72666743 72669655 Car03g02697 03 72666743 72669655 ECH