Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02694 ATGGAGGACGAAAATTATTCAAAGGGAATAATGAGAACACAATCAGATCAACTAGTAGAGTCAGTGGTAGCATCTTTAAAATCGCCACCAGGATCAAGTGAGTCAATACGCGGAGTGGTGGAAGGTGGTAGTGGGAGTTTGATAAGGAAGTCGAGCAAGAGGGCGTCGCCGAGCGGAAGAAACACACACATAAGGAAGGCAAGGAGTGCCCAAACTTCATTGAAAGTTGATTTGGATGATGTTAGTAGTGGTGCTGCCCTTAGTAGAGCTTCAAGTTTGGGACTCTCATTCTCTTTCACTGGATTCTCTATTCCTCTTGATGAAATCTCTAGCTCCAAACCATTCAGTGATGATGATATCCCTGAGGATATTGAAGCTGGAATTCACAAGCCAAAGTTTCAAACGGAACCTACTCTGCCAATATATCTAAAGTTCACGGATGTGACATACAAGGTAGTGATTAAGGGTATGACAACAAGTGTGGAGAAAGACATATTGAAAGGGATCAGTGGTTGTGTAAATCCAGGGGAGGTTTTGGCATTGATGGGTCCTTCTGGAAGTGGAAAAACATCTTTGTTAAATTTACTTGGTGCTAGATCATGTCAACCAACAGTTGGTGGTTCTATCACTTATAATGACCAACCATATTCCAAGTTCCTTAAGAGCAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACTTGACTGTGAAGGAAACATTGACATATGCAGCTCGTTTAAGGTTGCCAAAAACATTAACCAGACAGCAAAAGGAAAAAAGGGCTTTAGATGTTATCTATGAGCTAGGCTTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCATTTGTTAGAGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGCATTGGCAATGAGATCATTATCAATCCTTCTCTTTTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGAATTGTTCAAATGCTACATGACATCGCTGAGGCTGGTAAAACTATAGTGACAACAATTCATCAACCATCAAGTAGACTCTTTCACAAATTTGACAAGTTGATCCTTTTGGGAAAAGGGAACTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGGACTACTTTGGATTTATAGGTTGTACTCCTCTAATTGCAATGAATCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACATGAATGATATTTCTGTACCATCAGAGTTAGAGGATAAAGTGCATATGGGAAATGTAGAAGTTGAAACATCCAATGGAAAACCATCAGCTGCAGTTGTACAAGATTATCTGGTGGAGGCATATGAGACTCGAGTAGCGGAAACAGAGAAGAAAAAACTAATGGATCCAATTCCACTCGACGAAGAAGTGAAGTCTAAGGTTTATTCGCGTAAAAGACAGTGGGGAGCAAGTTGGTTTGAGCAATATACAATATTGTTTTCAAGAGGATTCAAAGAACGTAGGCATGAATATTTTAGCTGGTTGAGAATAACACAAGTTCTTTCCACTGCTGTCATATTGGGGTTACTTTGGTGGCAATCAGATGCTAGCAACCCAAAGGGTCTTCAAGACCAGGCAGGATTGCTTTTCTTTATCGCGGTGTTTTGGGGATTCTTTCCTGTGTTCACAGCAATATTTACATTTCCTCAAGAGAGAGCAATGTTGAATAAGGAAAGAGCAACAGATATGTACAGATTAAGTGCATACTTTGTGGCTAGAACTACAAGTGACCTTCCACTAGACCTTGTATTGCCAGTGCTTTTCCTTATTGTTGTTTATTTCATGACTGGTTTGAGACTAAGTGTGGGACCCTTTTTCCTTAGTATTCTTACAGTTTTTCTTTGTGTTGTGGCAGCTCAGGTATGTATTGTAGTAATTTAG 1911 0.4019 MEDENYSKGIMRTQSDQLVESVVASLKSPPGSSESIRGVVEGGSGSLIRKSSKRASPSGRNTHIRKARSAQTSLKVDLDDVSSGAALSRASSLGLSFSFTGFSIPLDEISSSKPFSDDDIPEDIEAGIHKPKFQTEPTLPIYLKFTDVTYKVVIKGMTTSVEKDILKGISGCVNPGEVLALMGPSGSGKTSLLNLLGARSCQPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTRQQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEAGKTIVTTIHQPSSRLFHKFDKLILLGKGNLLYFGKASEAMDYFGFIGCTPLIAMNPAEFLLDLANGNMNDISVPSELEDKVHMGNVEVETSNGKPSAAVVQDYLVEAYETRVAETEKKKLMDPIPLDEEVKSKVYSRKRQWGASWFEQYTILFSRGFKERRHEYFSWLRITQVLSTAVILGLLWWQSDASNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLVLPVLFLIVVYFMTGLRLSVGPFFLSILTVFLCVVAAQVCIVVI 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02694 636 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 14 631 - -
Car03g02694 636 SMART AAA_5 175 366 IPR003593 -
Car03g02694 636 Pfam ABC-2 type transporter 485 632 IPR013525 GO:0016020|GO:0140359
Car03g02694 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 389 IPR003439 GO:0005524
Car03g02694 636 MobiDBLite consensus disorder prediction 49 68 - -
Car03g02694 636 ProSitePatterns ABC transporters family signature. 289 303 IPR017871 GO:0005524
Car03g02694 636 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 631 - -
Car03g02694 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 383 IPR027417 -
Car03g02694 636 MobiDBLite consensus disorder prediction 21 68 - -
Car03g02694 636 CDD ABCG_EPDR 140 371 - -
Car03g02694 636 Pfam ABC transporter 166 317 IPR003439 GO:0005524
Car03g02694 636 Gene3D - 142 381 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02694 Car-Chr3 72635630 72645464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02694 165 375 Calmodulin-binding Proteins AT2G36910 28.571 2.16e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02694 K05681 - gmx:100798801 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02694 03 72635630 72645464 Car03g02694 03 72635630 72645464 ECH
Car03g02694 03 72635630 72645464 Car04g02111 04 27375295 27381446 PCT