Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car03g02676 | ATGGCTTCTGCAACATCTTCTATTTCCTCATCTATCTACAACAATAGAATCTACAACCTCTCATTCACCCATTCTTCCATTTCACTCACCACCACCAACTTCCCTCAAAGACCCATTTCCCATAAACCCTtcaatctcaacctcaactctcaaagtttcaatctTTGCCCTATCCCACTTCAAATTCTTCACCCCCCGTTCGCTTCCTTAGATGAATTCCAAGTTTCTCAACAAGagaactcagaatcagaaccacaaacagaaacaTTTGAAAAACCACAGCAAGAAGAAGAGCAGAAAGTAACAATCTCAGACGATGCTGGGAGACTCTATGTTGGAAACTTGCCATTTTCAATTACTTCTTCTCAGTTGGCTGAGATCTTTGCAGAAGCTGGTACTGTCGTGTCTGTTGAGATTGTGTATGATCGAGTCACTGACAGGAGCAGAGGATTTGCATTTGTTACAATGAAGAGTGTTGAAGAAGCTAAAGAAGCAATTCGAATGTTTGATGgttctCAAATTGGTGGTAGGAGTGCTAAGGTAAACTTTCCAGAAGTGCCCAAAGGAGGTGAAAGGTTGGTAATGGGGAAAAAAGTAAGGAGCGCCTACAAAGGCTTTGTTGATAGTCCTCACAAGATTTATGCTGGAAACCTTGGCTGGGGACTGAACTCTCAGGAACTTAGAGATGCCTTTGCTGAACAGCCAGGCTTATTGGGTGCCAAGGTCATTTATGAGAGGGACAATGGAAGATCTCGAGGTTTTGGATTCGTCACTTTTGAAACTGCCGAGAATTTAGAGGCTGCTTTGAACGCAATGAATGGCGTGGAAGTTCAAGGCCGGCCCTTGCGATTGAATTTGGCTTCAGAGAGGACAACCTCATCTCCTCCTCCGGTAGTTGAGGAAAATACAAAAAGCAATGTTGATAGCTCAGAATTGGTGTCTAGTGCCAGCACTTGA | 957 | 0.4065 | MASATSSISSSIYNNRIYNLSFTHSSISLTTTNFPQRPISHKPFNLNLNSQSFNLCPIPLQILHPPFASLDEFQVSQQENSESEPQTETFEKPQQEEEQKVTISDDAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFAFVTMKSVEEAKEAIRMFDGSQIGGRSAKVNFPEVPKGGERLVMGKKVRSAYKGFVDSPHKIYAGNLGWGLNSQELRDAFAEQPGLLGAKVIYERDNGRSRGFGFVTFETAENLEAALNAMNGVEVQGRPLRLNLASERTTSSPPPVVEENTKSNVDSSELVSSAST | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car03g02676 | 318 | PANTHER | OS02G0815200 PROTEIN | 4 | 299 | - | - | |
Car03g02676 | 318 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 211 | 289 | IPR000504 | GO:0003723 | |
Car03g02676 | 318 | MobiDBLite | consensus disorder prediction | 85 | 99 | - | - | |
Car03g02676 | 318 | Gene3D | - | 69 | 192 | IPR012677 | - | |
Car03g02676 | 318 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 108 | 186 | IPR000504 | GO:0003723 | |
Car03g02676 | 318 | CDD | RRM_HP0827_like | 109 | 185 | - | - | |
Car03g02676 | 318 | PANTHER | RNA-BINDING PROTEIN CP33, CHLOROPLASTIC | 4 | 299 | - | - | |
Car03g02676 | 318 | MobiDBLite | consensus disorder prediction | 75 | 99 | - | - | |
Car03g02676 | 318 | SMART | rrm1_1 | 109 | 182 | IPR000504 | GO:0003723 | |
Car03g02676 | 318 | SMART | rrm1_1 | 212 | 285 | IPR000504 | GO:0003723 | |
Car03g02676 | 318 | MobiDBLite | consensus disorder prediction | 287 | 318 | - | - | |
Car03g02676 | 318 | SUPERFAMILY | RNA-binding domain, RBD | 208 | 292 | IPR035979 | GO:0003676 | |
Car03g02676 | 318 | Gene3D | - | 196 | 295 | IPR012677 | - | |
Car03g02676 | 318 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 213 | 283 | IPR000504 | GO:0003723 | |
Car03g02676 | 318 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 110 | 178 | IPR000504 | GO:0003723 | |
Car03g02676 | 318 | SUPERFAMILY | RNA-binding domain, RBD | 104 | 184 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car03g02676 | Car-Chr3 | 72511595 | 72514230 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car03g02676 | 95 | 290 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 33.500 | 7.49e-23 | 97.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car03g02676 | - | - | gmx:100814852 | 438.728 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car03g02676 | 03 | 72511595 | 72514230 | Car04g02092 | 04 | 27025544 | 27028101 | PCT |