Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02669 ATGGCGACGTACTTTCATGGTAATAATAATTCCGACCAAAGTGGCGGCGCCGACGGACTCCAAACACTTGTTCTAATGAATCCAACCTATATTCAATATTCCGACACTACACAACAACCACCACCACCATCTCACTCCTCCACGGGTAACCTTGTTTTTCTCAACTCCACAACCACCAACAACAACTCCTATTCACCTCACGCGCCGCCTTCTCACACTCAACAATTCGTCGGCATCCCTCTCACAACAAATTCACAAGACATCAACAACCAACACTCTATTCACGCGCACCATGACGTTCCTTCCTTGCATGGCTTCCTCCCCCACATGCAGTACAATCAGTGGAACTCAATTGACACCAACGCGGCGGCGCGTGAAACACCACGCGCTCAGCAAGGATTGTCTTTAACCTTATCTTCACAGCCAGCAAGGTTCGTTTCTTTTCGGGAGGGTGGTGCTATGCCTGGTGGTGGGTCGCCTTCACCGTCGCCGGGTTCGGGTGTTACTAATAATAATAATGGCGGCAGCAATTCAGGGATTCATAGTGTGGTGGTGAGTTCGAAGTATTTGAGAGCTGCACATGAGCTTCTAGAAGAGGTTGTGAATGTGAATAGTGGAATTGAATTGGGAAAGAAGAGTGTTGGTAGAGAGAAGAACAAGGTGATTGGAGAGTCATCGGGAGGAGATGGATCAATTATTGGTGGTGGTGAGGGAAGTGGGAAGCGTAGCATTGAGCTATCAACATCTGAAAGACAAGAAATTCAGATGAAAAAAGCAAAGCTAATCAACATGCTTGATGAGGTGGAACAAAGGTACAGACAGTACCACCATCAAATGGAGGTTGTGGTTTCATCATTCGAACAAGTTGCAGGGATTGGTTCCGCAAGGACATACACTGCCCTTGCACTACAAACAATCTCCAAGCAATTTAGGTGTTTGAAAGATGCCATAGCTGGACAAATTCGTGCTACAAATAAGAGTTTGGGAGAAGATGATTGCTTTGGAGTTAAAATTGAAGGTTCAAGGCTTAAATATGTAGATCATCAATTACGTCAACAACGTGCTCTTCAACAGTTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGCGCTTGGCTCTTTGAACACTTCCTTCACCCTTATCCCAAGGATTCAGATAAGCTCATGCTTGCAAAACAAACAGGACTTACTAGGAGTCAGGTTTCAAATTGGTTTATAAATGCTCGAGTTCGGCTTTGGAAGCCCATGGTGGAAGAGATGTACTTAGAGGAGATGAAGGAGAATGAACTAAATGGGTCAGAGGATAAATCAAGCAAGAGCAATGAAGATTCCTCTATGAAAATAGCTTCACCTCAAGACAAAGTTCTTACTTCTGAAACAGATGTTAAAGGTTACAATTCCACACAAGAAGTTTCCATAAGCCAAGACACTAGTCCAATAATTTCAGTTTCTAAAAGACAACAAACATCACCACTTGGTGGAAATGTTAGAAACCAATCAGGATTCAGCTTCATTGGGTCATCAGAACTAGAAGGAATAGCACAAGGAAGTCCTAAAAAATCAAGGAACCATGAACTTATGCATTCTTCAAATAGTTTCCCTTTAGTTAACATGGATGTTAAACACAATGAGGGAAATAATGAGGAAATTTCAATGAAATTTGGTGATGAGAGGCATAGTAGAGATGGTTATTCTTTTATGGGAAACCAAACAAACTTCATTGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGACTCAGAACAATTCACAACACCAAGGTTTTCAAGTAATGGTGTTTCACTCACTCTTGGTCTTGATTCAATACAAGGAACTCATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCCTTGACATAAGTGAACAAAATGAGTTTGGTTCCATAAACACTTCTTCTCCTCATTCTACAGGTCCTTTTGAGAGTATCAACATGCAAAACCCAAAAAGGTTTGCTGCACAGTTGTTACCAGACTTTGTGTCCTAA 2061 0.4216 MATYFHGNNNSDQSGGADGLQTLVLMNPTYIQYSDTTQQPPPPSHSSTGNLVFLNSTTTNNNSYSPHAPPSHTQQFVGIPLTTNSQDINNQHSIHAHHDVPSLHGFLPHMQYNQWNSIDTNAAARETPRAQQGLSLTLSSQPARFVSFREGGAMPGGGSPSPSPGSGVTNNNNGGSNSGIHSVVVSSKYLRAAHELLEEVVNVNSGIELGKKSVGREKNKVIGESSGGDGSIIGGGEGSGKRSIELSTSERQEIQMKKAKLINMLDEVEQRYRQYHHQMEVVVSSFEQVAGIGSARTYTALALQTISKQFRCLKDAIAGQIRATNKSLGEDDCFGVKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKLMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKENELNGSEDKSSKSNEDSSMKIASPQDKVLTSETDVKGYNSTQEVSISQDTSPIISVSKRQQTSPLGGNVRNQSGFSFIGSSELEGIAQGSPKKSRNHELMHSSNSFPLVNMDVKHNEGNNEEISMKFGDERHSRDGYSFMGNQTNFIGGFGQYPIGDIGRFDSEQFTTPRFSSNGVSLTLGLDSIQGTHQTFLPNQNIQLGRSLDISEQNEFGSINTSSPHSTGPFESINMQNPKRFAAQLLPDFVS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02669 686 Gene3D - 363 441 - -
Car03g02669 686 MobiDBLite consensus disorder prediction 439 471 - -
Car03g02669 686 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 16 636 - -
Car03g02669 686 MobiDBLite consensus disorder prediction 439 454 - -
Car03g02669 686 MobiDBLite consensus disorder prediction 220 242 - -
Car03g02669 686 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
Car03g02669 686 SUPERFAMILY Homeodomain-like 368 434 IPR009057 -
Car03g02669 686 MobiDBLite consensus disorder prediction 148 175 - -
Car03g02669 686 SMART HOX_1 367 431 IPR001356 GO:0003677
Car03g02669 686 CDD homeodomain 367 428 IPR001356 GO:0003677
Car03g02669 686 SMART prehox3 178 319 IPR006563 -
Car03g02669 686 Coils Coil 251 278 - -
Car03g02669 686 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Car03g02669 686 MobiDBLite consensus disorder prediction 455 471 - -
Car03g02669 686 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 16 636 - -
Car03g02669 686 Pfam Associated with HOX 183 318 IPR006563 -
Car03g02669 686 MobiDBLite consensus disorder prediction 33 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02669 Car-Chr3 72450475 72455845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02669 1 686 Homeobox Transcription Factor Family AT2G35940 47.820 7.85e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Car03g02669 POX 3.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02669 - - gmx:100810901 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02669 03 72450475 72455845 Car03g02669 03 72450475 72455845 ECH
Car03g02669 03 72450475 72455845 Car04g02080 04 26624500 26629565 PCT