Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02665 ATGAACCACACAACAACTCTTCTTCTCCTCATCTTCCTCCTCCCACTTTCTCTAGTCCACACAATCACCGACCCAAACGACCTCAAAATCCTCACCCAATTCAAAAACAATCTACAAAACCCCCAACTTCTACAATGGCCAAAACTAAACAACGACCCTTGTGGCCCACCATCTTGGAAATTCATCTTCTGTGACGGTAACAGAGTTACACAGATTCAAACCAAAAACTTAAACCTAATCGGTACTTTACCTCCAAATCTCAACCAACTCACTCAACTCACTAATTTGGGTTTCCAAAATAACAAACTCAACGGTCCATTACCGTCGCTAAAAGGCTTGTCCAACCTTAAATATGCTTTCTTTGACAACAATGAattcgattccattcctttcgatttcttccaAGGGTTGTCGAGTTTAGAGACTCTTGCATTGGATAATAATTATCTTAATGTTACTACTAATGGTTGGAATTTTCCTTCTTCGTTGCAGGATTCACCTCAGTTAACAACACTTTCTTGTATGAGTTGTAATTTGGCTGGTAATTTGCCCGATTTTCTAGGGAAAATGAACTCTCTTTCCTTTTTGAAACTTTCCGGTAACAGTTTCACCGGAGAGATCCCGCTGAGTCTTAACGGTTCTGGTTTGCAGGTTCTTTGGTTGAATAATCAAAAGGGTGAGTTGTTATCTGGGAGTATTGATGTTGTTGTTACTATGGTTTCTCTTACTAGTCTGTGGCTTCATGGAAACCGCTTCTCCGGTTCCATTCCAGAGAATATTGGAGACTTAGTTTCTCTTAAGGATCTTAATCTTAATGGAAATGAACTTGTTGGTCTTATCCCTGATTCTTTAGGTGATATGGAACTGGATAAGCTTGATTTGAATAATAACCAGTTTATGGGTCCGATCCCAAATTTTAAAGCTTTGAATGTTTCTTATAGTAATAATGATTTTTGTGTAAACAAAACTGGTGTTCCTTGTTCATTTGAAGTTATGGCTCTTTTGGGGTTTCTTGGTGGGTTGAATTATCCTTCAAATCTAGTTGATTCATGGAGTGGGAATGACCCTTGTGAAGGACCTTGGTTGGGGATAAAATGTAATGGTGATGGTAAAGTTTCTATGATTAATTTGCCTCATTTCAATCTTAGTGGTACTTTAAGTCCTTCTGTTGCAAATTTAGGTTCTTTGGTTGAAATTAGATTGGGAGGTAACAATCTTAATGGTGTTGTACCAAGTAATTGGACTGGTTTGATGAATCTGAAATTGTTGGATCTGAGTGACAATAATATTTCGCCTCCTTTGCCGGTTTTTAGTAACGGGTTGAAACCTATGGTTGATGGGAATTCATTGTTGAATGGTGGCACAGAAGGTCCTTCCTCGGGGAAAACCAGTCCATCAGGTCGAACTGGGACTGGTGGAGATACACAGGGACACTCAAATTCATCGAGTTCAACTGATTCGGTTGGAGCGAAAAAATCTACAAGGAAAGGCTTGGTTTTGATTGTAGCCCCTATTGCTGGTGTGGCGGCTGCTGCATTTCTGTTGATTCCGCTTTATGCATATTGTTTCAGGAGGACAAAGGATGGATTCCAGGCTCCAAGTTCACTTGTGATTCATCCTCGAGATCCATCTGATTCCGATAGTACCATAAAAATAGCTATTGCTAATAATACAAATGGAAGCGTTTCAACTTTGACAGGGAGTGGAACTGGAAGTAGAAACAGCAGTGCAGTTGGCGACTCTCATGTCATTGAAGCTGGGAACCTTGTGATATCGGTTCAAGTTCTAAGAAACGTGACCAAGAATTTCGCTCCCGAGAACGAGCTCGGCCGTGGTGGATTTGGGGTTGTTTATAAGGGAGAGTTGGATGACGGGACTAAGATTGCTGTAAAAAGAATGGAAGCAGGTGTGATTAGCACTAAAGCCTTAGACGAATTCCAGGCCGAAATCGCAGTTCTATCGAAAGTCCGACATCGGCATCTAGTGGCCCTCTTAGGTTATTCTATtgaaggtaatgagaggattctagtgtatgaatatatgccacaaggtgctcttagtaggcatcttttccattggaagagctttgaattggaGCCACTCTCATGGAAGAGGAGGCTCAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTTGGTCACCAGAGCTTCATTCACAGAGATCTTAAGTCCTCAAATATCTTGCTTGCTGATGATTTTAGAGCTAAAGTCTCTGATTTCGGATTGGTGAAACTTGCTCCTGATGGCGAAAAAAAATCTGTTGTGACCAGGCTTGCTGGGACCTTTGGATACTTGGCTCCGGAATATGCAGTGACAGGAAAAATCACTACCAAAGCAGATGTTTTCAGTTTCGGGGTTGTGCTAATGGAGCTATTGACAGGATTGATGGCGCTCGATGATAATAGACCCGAGGAAAGCCAATACTTGGCATCATGGTTCTGGCATATAAAATCAGATAAGAAGAAACTAATGGCCGCTATTGATCCAGCTCTTGATATAAAAGAAGAAACTTTCGAGAGCGTCTGCATTATTGCCGAGCTAGCTGGACACTGCACCGCTAGAGAACCAAACCAAAGGCCAGAAATGGGTCATGCTGTAAATGTTCTTGGACCCCTTGTTGAAAAATGGAAACCGTTCGATGACGACACTGAGGAGTATTCCGGTATCGATTATAGCCTTCCTCTTAACCAGATGGTAAAAGGATGGCAAGAGGCCGAAGGAAAGGACACGAGTTATATGGACCTTGAAGACAGTAAAAGTAGTATCCCGGCAAGACCTGCCGGATTTGCAGATTCTTTTACTTCAGCCGATGGCCGATGA 2853 0.4006 MNHTTTLLLLIFLLPLSLVHTITDPNDLKILTQFKNNLQNPQLLQWPKLNNDPCGPPSWKFIFCDGNRVTQIQTKNLNLIGTLPPNLNQLTQLTNLGFQNNKLNGPLPSLKGLSNLKYAFFDNNEFDSIPFDFFQGLSSLETLALDNNYLNVTTNGWNFPSSLQDSPQLTTLSCMSCNLAGNLPDFLGKMNSLSFLKLSGNSFTGEIPLSLNGSGLQVLWLNNQKGELLSGSIDVVVTMVSLTSLWLHGNRFSGSIPENIGDLVSLKDLNLNGNELVGLIPDSLGDMELDKLDLNNNQFMGPIPNFKALNVSYSNNDFCVNKTGVPCSFEVMALLGFLGGLNYPSNLVDSWSGNDPCEGPWLGIKCNGDGKVSMINLPHFNLSGTLSPSVANLGSLVEIRLGGNNLNGVVPSNWTGLMNLKLLDLSDNNISPPLPVFSNGLKPMVDGNSLLNGGTEGPSSGKTSPSGRTGTGGDTQGHSNSSSSTDSVGAKKSTRKGLVLIVAPIAGVAAAAFLLIPLYAYCFRRTKDGFQAPSSLVIHPRDPSDSDSTIKIAIANNTNGSVSTLTGSGTGSRNSSAVGDSHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISTKALDEFQAEIAVLSKVRHRHLVALLGYSIEGNERILVYEYMPQGALSRHLFHWKSFELEPLSWKRRLNIALDVARGMEYLHTLGHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPDGEKKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDDNRPEESQYLASWFWHIKSDKKKLMAAIDPALDIKEETFESVCIIAELAGHCTAREPNQRPEMGHAVNVLGPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDTSYMDLEDSKSSIPARPAGFADSFTSADGR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02665 950 SUPERFAMILY Protein kinase-like (PK-like) 581 880 IPR011009 -
Car03g02665 950 Pfam Protein tyrosine and serine/threonine kinase 606 878 IPR001245 GO:0004672|GO:0006468
Car03g02665 950 SUPERFAMILY L domain-like 330 439 - -
Car03g02665 950 Gene3D Ribonuclease Inhibitor 25 326 IPR032675 -
Car03g02665 950 MobiDBLite consensus disorder prediction 452 489 - -
Car03g02665 950 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Car03g02665 950 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Car03g02665 950 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 950 - -
Car03g02665 950 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Car03g02665 950 Gene3D Ribonuclease Inhibitor 329 452 IPR032675 -
Car03g02665 950 SMART serkin_6 603 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02665 950 SMART LRR_typ_2 393 416 IPR003591 -
Car03g02665 950 SMART LRR_typ_2 137 160 IPR003591 -
Car03g02665 950 SMART LRR_typ_2 263 286 IPR003591 -
Car03g02665 950 SMART LRR_typ_2 417 439 IPR003591 -
Car03g02665 950 SMART LRR_typ_2 239 262 IPR003591 -
Car03g02665 950 SMART LRR_typ_2 113 136 IPR003591 -
Car03g02665 950 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Car03g02665 950 Gene3D Transferase(Phosphotransferase) domain 1 681 899 - -
Car03g02665 950 ProSiteProfiles Protein kinase domain profile. 603 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02665 950 PANTHER OSJNBA0070M12.3 PROTEIN 4 950 - -
Car03g02665 950 MobiDBLite consensus disorder prediction 921 950 - -
Car03g02665 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Car03g02665 950 Gene3D Phosphorylase Kinase; domain 1 567 680 - -
Car03g02665 950 SUPERFAMILY L domain-like 23 310 - -
Car03g02665 950 MobiDBLite consensus disorder prediction 447 489 - -
Car03g02665 950 CDD STKc_IRAK 609 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02665 Car-Chr3 72391780 72395805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02665 87 917 Receptor kinase-like Gene Family AT1G55610 30.150 1.01e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Car03g02665 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02665 - - gmx:100305366 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02665 03 72391780 72395805 Car03g02665 03 72391780 72395805 ECH