Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02638 ATGTCAAAAACAACGCTATGGTGGAGTCAAGAaaaacaacaagacgaagaagaaaatgaaaacgaaaacgaaaacgaCGTCGTTTTAGAGGAGACAAACACAGCAACACAGGAAGAAGAGAAAGAAGCGATGTTCGAGAAACCGTTAACACCAAGCGACGTAGGGAAACTAAACCGACTGGTGATACCGAAACAACACGCGGAACGTTATTTCCCACTCGACTCAGAGGAAATAAAAGGTTTGTTACTGAGTTTCGAGGACGAGTCAGGTAAGTGTTGGAGGTTCCGTTATTCGTATTGGAACAGTAGTCAGAGTTACGTTCTAACCAAAGGTTGGAGTCGTTATGTTAAGGATAAGCGTCTCGATGCTGGCGACGTCGTTTTGTTTCATAGACACCGTTTTTGTCCCAAGCGTTTTTTTATTTCTTGGAGGCGCCGTAATAATAGTTTCTCTACTACACCACCGGCTCATCTTAGCGATGCTAATGGGAATATTTCTCTTGGCTGGTCCACAGGATTTTATCCTGCGCATCCTTATCCTACGCATCATCAAACCGTCTCATACCATGCAGGTTTTTACCTCTCTTTCTTTCATGTGGAGGGTCCCAAAGTCAGAGCCCAACCACACCTTGTGGAAATAGTTCGAGTTCGAGTACTTTCAGGGTGCTAA 669 0.4185 MSKTTLWWSQEKQQDEEENENENENDVVLEETNTATQEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFHRHRFCPKRFFISWRRRNNSFSTTPPAHLSDANGNISLGWSTGFYPAHPYPTHHQTVSYHAGFYLSFFHVEGPKVRAQPHLVEIVRVRVLSGC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02638 222 MobiDBLite consensus disorder prediction 1 46 - -
Car03g02638 222 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 11 153 - -
Car03g02638 222 CDD B3_DNA 44 134 IPR003340 GO:0003677
Car03g02638 222 ProSiteProfiles B3 DNA-binding domain profile. 45 147 IPR003340 GO:0003677
Car03g02638 222 SMART B3_2 45 147 IPR003340 GO:0003677
Car03g02638 222 Gene3D - 32 155 IPR015300 -
Car03g02638 222 SUPERFAMILY DNA-binding pseudobarrel domain 42 146 IPR015300 -
Car03g02638 222 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 11 153 IPR044800 GO:0003700
Car03g02638 222 Pfam B3 DNA binding domain 45 147 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02638 Car-Chr3 72168324 72170267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02638 39 147 RAV Transcription Factor Family AT2G36080 81.416 1.47e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car03g02638 B3 2.9e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02638 - - cam:101494766 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02638 03 72168324 72170267 Car03g02638 03 72168324 72170267 ECH
Car03g02638 03 72168324 72170267 Car04g02049 04 25881831 25884841 PCT