Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02634 ATGAGCAAACAAACAAGCGCCCTAACGCCTTGTTTGTTGCACTCGAATTCAATGGCGTTCATCACAAGATTAGTCGGCTGCAGTCATTCTGTTTCTCCGTTTCTCCTCACTTTCCGCAGAGCAATTGCTTTCAAGCTTTTTGTTGGAGGACTATCCTTTCACGCGACAGAGAAAACATTGTCAGATGCATTCTCAAATTATGGACAAGTTGTTGAAGCTAAAGTTATAAAGGATAGGGTATCGGAGAGATCTAAAGGGTATGGATTTGTCACTTTTGCTTCACAAGATGAGGCTGAGAATGCCATAGCAGAGATGAATGAAAAGGCACTAGACGGGCGCGTTATCTTTGTTGATTATGCAAAACCAGATACTAAACGTAGTATGGGAATGCCAATTGCCAGAGGACCTCCTGAAGATCGGATCCAACAACCAACTGTTGATTCCCCTCAGGACACATGA 459 0.4336 MSKQTSALTPCLLHSNSMAFITRLVGCSHSVSPFLLTFRRAIAFKLFVGGLSFHATEKTLSDAFSNYGQVVEAKVIKDRVSERSKGYGFVTFASQDEAENAIAEMNEKALDGRVIFVDYAKPDTKRSMGMPIARGPPEDRIQQPTVDSPQDT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02634 152 Gene3D - 40 145 IPR012677 -
Car03g02634 152 SUPERFAMILY RNA-binding domain, RBD 44 137 IPR035979 GO:0003676
Car03g02634 152 PANTHER TRANSFORMER-2-RELATED 33 141 - -
Car03g02634 152 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 33 141 - -
Car03g02634 152 MobiDBLite consensus disorder prediction 126 152 - -
Car03g02634 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 115 IPR000504 GO:0003723
Car03g02634 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 122 IPR000504 GO:0003723
Car03g02634 152 SMART rrm1_1 45 118 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02634 Car-Chr3 72135215 72136717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02634 46 127 Eukaryotic Initiation Factors Gene Family AT4G34110 42.857 1.13e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02634 - - lja:Lj1g3v4721740.1 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02634 03 72135215 72136717 Car03g02634 03 72135215 72136717 ECH