Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02629 ATGGAAAACATGCTACCGGGTTATCGTTTCTATCCTACAGAAGAAGAGCTTATTTCCTTTTATCTTCACAATATGCTTGAAGGAGATAATGAATATAAGATTCGTACTGTTATACCTGTCGTTAATATTTATGACTACAATCCATCGGAACTCCCACAAATATCCGGAGAGGCAAGTATGAGAGATATGGAGCAATGGTTCTTTTTCATTAAAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAAGCGTGTCACAACTACTGGGTATTGGAAAGCCACTGGATCTCCTAATCATGTTTATTCTTCTCATAATCATATTATAGGTATGAAGAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAATGGGAAGAAAACCGATTGGAAAATGAATGAGTATAAGGCCATCCAAGACCAACCATCCTCTTCAAATAAATTGGCTCCTATGTTAAGGAATGAAATGAGTTTATGCCGAGTGTACAAGAAATCAAAATGCTTGAGAGCATTTGATAGACGACCGGCACCAAGGAGGGTCACAAACGATCAAGAGTTCAATAAGGATTCAACAATATGCAATCATAATAATGTTCAAATATTTGCAACAAGCTCACCAGATAGCTCTTCATCTCTAGACCATGGTCAAACCTCAAATGAGGTTGGAGAAGGTAGTCAAATGGATATTAATGTTGATCACCGTGAGCCTTTGTTGTATTGGGAGCATGTGGATTGGTTCTTGGGAATAGAACCATGA 753 0.3851 MENMLPGYRFYPTEEELISFYLHNMLEGDNEYKIRTVIPVVNIYDYNPSELPQISGEASMRDMEQWFFFIKRQESEVRGGRPKRVTTTGYWKATGSPNHVYSSHNHIIGMKRTMVFYSGRAPNGKKTDWKMNEYKAIQDQPSSSNKLAPMLRNEMSLCRVYKKSKCLRAFDRRPAPRRVTNDQEFNKDSTICNHNNVQIFATSSPDSSSSLDHGQTSNEVGEGSQMDINVDHREPLLYWEHVDWFLGIEP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02629 250 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Car03g02629 250 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
Car03g02629 250 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 242 - -
Car03g02629 250 MobiDBLite consensus disorder prediction 202 223 - -
Car03g02629 250 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Car03g02629 250 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 242 - -
Car03g02629 250 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02629 Car-Chr3 72107101 72109110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02629 7 244 NAC Transcription Factor Family AT5G22380 46.281 9.77e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g02629 NAM 7.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02629 - - lang:109348309 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02629 03 72107101 72109110 Car03g02629 03 72107101 72109110 ECH