Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02622 ATGCTAGGGAAAAAGATTGTATCGATCAAGAAGTTAGCGAAAAAGGTGAAGGTTGTAAGTGGAGTTGAATCTGACCCTGTTCACTCTAAGTTATTGAAGGATTATGAAGAAAATAAAAAACACCCAATCACCAAAAAAATTGGGTCAAAAAAAAGTGGTGTTTTTGCACTATATGTTGGAGAGGAGCGACAAAGATACGTGGTTCCAACCCGTTACCTTTGTCACCCGTTATTCAAGATGTTGTTGGAGAAGGCTTACGATGAATTTGGTTTTGAACAGAGGAATGGTTTGGTAGTTCCATGTAGTGTTTCAGCATTTCATCAGGTGGTCAATGCTATTGAATGTAACAATTGCAAGTTTGACATGAGAAATATTTTTGCTGAGTTGGTTTGA 393 0.374 MLGKKIVSIKKLAKKVKVVSGVESDPVHSKLLKDYEENKKHPITKKIGSKKSGVFALYVGEERQRYVVPTRYLCHPLFKMLLEKAYDEFGFEQRNGLVVPCSVSAFHQVVNAIECNNCKFDMRNIFAELV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02622 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 129 IPR003676 GO:0009733
Car03g02622 130 Pfam Auxin responsive protein 48 112 IPR003676 GO:0009733
Car03g02622 130 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02622 Car-Chr3 72046143 72047341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02622 53 116 Calmodulin-binding Proteins AT5G20810 50.000 1.54e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02622 K14488 - gmx:100776885 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02622 03 72046143 72047341 Car03g02622 03 72046143 72047341 ECH