Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02618 ATGGATGCATCAAAAACCGCAGTCTTTGTCAATGCAGAACTGTTACCCTTTTATGTTGGAAGGAGGGTTCGTACAGTGATGCAGGTTGTGCGATCTGATGGTGTAGCTGTCATCGGAAAATCACCAGATGAGAAGCAGATGGTTGTAAAAGGATCAGCCCCACCAGCTCCTCTTACAAGTTTTGTAGAAGTTATCGGTATCGTTAACAGTGACAAGTCCATCCGTGCTGAGACATGGACCAACTTTGGTGATGCAATTGATATGTTCAGCTACTGTTTGAAAATTCCAATTCTGAGTTTTGGTAAACCCATCATCTCTAGCACTTGTCTCCCCAATAGGATTGACCGCCGTCGTCACTATCTTTTGATTATTGAAGGGGATAATTTGGGTTTCTTGAAAGCCCTTCAATGGGTGTTTGAGACAAAATATTATAATGTTACTTTTGAAGTTGTTTTTCTTGTTTTTGagcttctacttcaatttcgaattcgatttcgcttCCATTCAGTTGCCCTGCAAGCTTGA 525 0.3886 MDASKTAVFVNAELLPFYVGRRVRTVMQVVRSDGVAVIGKSPDEKQMVVKGSAPPAPLTSFVEVIGIVNSDKSIRAETWTNFGDAIDMFSYCLKIPILSFGKPIISSTCLPNRIDRRRHYLLIIEGDNLGFLKALQWVFETKYYNVTFEVVFLVFELLLQFRIRFRFHSVALQA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02618 174 Gene3D - 2 98 IPR012340 -
Car03g02618 174 Pfam Replication factor A protein 3 1 88 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Car03g02618 174 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 91 - -
Car03g02618 174 SUPERFAMILY Nucleic acid-binding proteins 9 84 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02618 Car-Chr3 72017471 72022193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02618 1 91 Core DNA Replication Machinery Family AT4G18590 58.242 2.13e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02618 K10740 - gmx:100306641 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02618 03 72017471 72022193 Car03g02618 03 72017471 72022193 ECH
Car03g02618 03 72017471 72022193 Car04g00202 04 2070662 2080030 PCT