Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02601 ATGGTGGTAAGGGAGGGTGAGATTAACTGGACACAAGGGGAGGTGGAATCGGCGTTGCATAGGGACGAAGAAGCGAACAAGATCGATGTTAATAACATTATCTCATCATCGTTGGGAAGACAATCATCGTCGATATATTCGCTCACCCTCGACGAGTTCCAGCACAGTCTCTGTGAGAGTGGCAAGAATTTCGGATCAATGAACATGGATGAGTTCTTAAGTAGTATTTGGAATGCAGAGGAGAATCAGCAAGCTGCTACCaacaataataataacatcaacaataacaataaTCTGTCTGTAATTTCGAAAGAGATTAGCAAACAGGCAAGCCTTCCTCGTCAAAATTCGCTGTCGATTCCTGCACCACTTTGTAGGAAAACCGTGGAACAAGTTTGGTCTGAGATACACAAAGAGCAACATCAGAACAACAACAATGTTGGTCAGATTACTGAGTCTGCCACTCGACAACCGACTTTCGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGGGTAGTTAGGGAACAACAATCTGTTATGCAGCCGGCTGCATTAGCAGTAGCACCTACTGTAGCTGCTGCGGTATCATCTCACCGGCCACAGCATTACACCGTGTATCCGAATAACAACTCTACGATGGCTGCTCAGGCTGGTTCTTTTGCTATTGGTGGCGGCACTGGGAATGTGGTTGCGCCGCCTTATCAAACGGTGGCTCAGGGAGGTGGAGCAGTTGGAGAGCCTTCGGGTTCAGGATATGTTGGGAATGGTAAGAGAGATAACATAGGTACTGGATATCCTCCGCCACCAGGGGTTTGTTATGGAGGGAGAGTGGTGAATGGAGGAGGTGGTGGTTATGGCGTGGCAGTGGCACAAACTATGGGAATGGGCGGACCGGTTAGTCCGGTTTCGTCCGATGGGATTGGTAATGATAACTCGGGCGGGAAATTTGGGATCGACATGAGTGGTTTAAGAGGAAGGAAGAGGATGATTGATGGTCCTGTTGAAAGAGTTGTGGAGAGAAGGCAAAGAAGAATGATCAAGAATAGAGAATCAGCAGCAAGATCTAGAGCAAGAAAACAGGCTTACACAGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAGAATTCACAACTGAAACAAGCACTGACCGAGCTCGAGAGGAGACGAAGGCAACAGTGTTCAGAGGAAACAAATGTGAGAGTGCAGACCAAAGCTCAGAAGGCAAAAGAGAAACTGAGAACCTTAAGAAGGAACACTAGTTGTCATCTGTGA 1284 0.4603 MVVREGEINWTQGEVESALHRDEEANKIDVNNIISSSLGRQSSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENQQAATNNNNNINNNNNLSVISKEISKQASLPRQNSLSIPAPLCRKTVEQVWSEIHKEQHQNNNNVGQITESATRQPTFGEMTLEDFLVKAGVVREQQSVMQPAALAVAPTVAAAVSSHRPQHYTVYPNNNSTMAAQAGSFAIGGGTGNVVAPPYQTVAQGGGAVGEPSGSGYVGNGKRDNIGTGYPPPPGVCYGGRVVNGGGGGYGVAVAQTMGMGGPVSPVSSDGIGNDNSGGKFGIDMSGLRGRKRMIDGPVERVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALTELERRRRQQCSEETNVRVQTKAQKAKEKLRTLRRNTSCHL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02601 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 345 360 IPR004827 GO:0003700|GO:0006355
Car03g02601 427 Coils Coil 76 96 - -
Car03g02601 427 Coils Coil 402 422 - -
Car03g02601 427 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 9 426 IPR043452 GO:0003700|GO:0045893
Car03g02601 427 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 9 426 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Car03g02601 427 MobiDBLite consensus disorder prediction 406 421 - -
Car03g02601 427 Gene3D - 340 397 - -
Car03g02601 427 CDD bZIP_plant_BZIP46 347 396 - -
Car03g02601 427 SUPERFAMILY Leucine zipper domain 342 392 IPR046347 GO:0003700|GO:0006355
Car03g02601 427 Pfam bZIP transcription factor 342 393 IPR004827 GO:0003700|GO:0006355
Car03g02601 427 SMART brlzneu 337 402 IPR004827 GO:0003700|GO:0006355
Car03g02601 427 MobiDBLite consensus disorder prediction 405 427 - -
Car03g02601 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 340 392 IPR004827 GO:0003700|GO:0006355
Car03g02601 427 Coils Coil 358 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02601 Car-Chr3 71916433 71920647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02601 1 396 bZIP Transcription Factor Family AT2G36270 48.206 5.55e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g02601 bZIP_1 6.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02601 K14432 - gmx:100790948 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02601 03 71916433 71920647 Car03g02601 03 71916433 71920647 ECH