Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02595 ATGGGAAAATGTGGGAGAttctttctcttcccttttctccttcttatctcttccttctcAATTCCACCACAACCACTCCTTCTTATCATCAATCAGGTAGGAGATCTTTCATCTGAAAACGTAGATCCATCACAATCTATGGCGGAAGAGCATCGATGTCAAGCTTCCGAAGGCCACAGACTCTGCGCAAATAATTGCGGTTTCTTTGGTAGTTCAGCTACGATGAATCTCTGCTCTAAATGTTACAGAGACATCCATTTGAAAGAACAAGAACAAGCCAAAACCAAAACTACGATTGAAACTGCTCTCTCCTCCGCCTCTTCCGCCGTCGTAGTAGCCGCTTCGCCGCTGCCGGCAATCGAATCCATTCCTCAACCGCCAGCGTTGACTATACCGTCTATCGTTTCTGACGCATCGGACTCCTCGACCGAAACGGTTCAGTCGAACCGGTGCGGAACGTGCCGGAAGCGGATCGGGTTAACCGGATTCAAGTGCAGATGTGGAATCACGTTTTGTGGGACCCACAGGTATCCTGAGAAACACGAGTGCTGTTTCGACTTCAAGGCGGTGGGGCGAGAGGAGATAGCTAAAGCGAATCCCTTGATCAAAGCAGACAAGCTGCGAAGAATTTGA 633 0.4613 MGKCGRFFLFPFLLLISSFSIPPQPLLLIINQVGDLSSENVDPSQSMAEEHRCQASEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKTTIETALSSASSAVVVAASPLPAIESIPQPPALTIPSIVSDASDSSTETVQSNRCGTCRKRIGLTGFKCRCGITFCGTHRYPEKHECCFDFKAVGREEIAKANPLIKADKLRRI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02595 210 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 61 110 - -
Car03g02595 210 SUPERFAMILY AN1-like Zinc finger 138 205 IPR035896 -
Car03g02595 210 SMART AN1_Zf_4 151 188 IPR000058 GO:0008270
Car03g02595 210 Pfam A20-like zinc finger 60 83 IPR002653 GO:0003677|GO:0008270
Car03g02595 210 Gene3D - 45 109 - -
Car03g02595 210 ProSiteProfiles Zinc finger AN1-type profile. 145 191 IPR000058 GO:0008270
Car03g02595 210 SMART A20_3 59 83 IPR002653 GO:0003677|GO:0008270
Car03g02595 210 Pfam AN1-like Zinc finger 151 187 IPR000058 GO:0008270
Car03g02595 210 Gene3D - 131 206 IPR035896 -
Car03g02595 210 ProSiteProfiles Zinc finger A20-type profile. 56 90 IPR002653 GO:0003677|GO:0008270
Car03g02595 210 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 47 210 - -
Car03g02595 210 PANTHER AN1-TYPE ZINC FINGER PROTEIN 47 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02595 Car-Chr3 71844933 71847415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02595 47 210 C2H2 Transcription Factor Family AT3G52800 53.529 1.27e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02595 - - gmx:100789686 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02595 03 71844933 71847415 Car03g02595 03 71844933 71847415 ECH
Car03g02595 03 71844933 71847415 Car04g02000 04 24168907 24169341 PCT