Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02588 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAAGGAGGACTTATGCATAGGGAAAGGTGCTTTAGGGATTTGCCAGTCCAATTCTCAGTACAAAACTTCTGAGAAAAATAAGAAGCCTTTGGTGCTGAACTTGGAATATAAAGATAATATTGGCAATGATATTAACAAGCTTTTTGAGTCAATTGCTCTTAAATCTTCATCAAAGGACTCGGGTCTTTTACACGATGGTACAAGCCATAAGCTGAAAAACACCTTAAAAAAGCCGATGGCAATGGGTGTTCCTCGGTCCCCACGAGTTGGAAGTTCTGAGCCTGTTAATTTGAAGCAGGCATTAAGAGACCTTTGTATATCTAAGGCATCAGAAGTGGCTGCCATGAGACGATTATCAAAGTCAACAGCTTCTCCAAGAATATCAGAGGTTGGGAGGATACAGACACTGTACAGTTCAGTTGTAGATGAAACCGGTCATTCTGGGCATTACATTGCTGAGAATAAAGGGTGTAGAACAGAAATATCTCTAGTGCCAGAAAAAAGCCAGTCATCCTCCTTGGATAAAACATCTCAACCTCATCAAACTACCCAAATCACATCATCGAGTCAAGCCATCAATTCTGCTTGGAAAATCGCTGTTGCAACTACTCAACTTGATTTCGGAACTTCATCAATGCAAAGTGATTTGGCATGTTCATCAAGTAAAGTTGGATTTCAATCTCAGCGTGTCGTACCTGTTCAACCAGAAAAACAAACATCTGCATCTTCTCCATCTCTGTATAATATGTCTGAAAGCAAATTAGAGTTGCCAGTAAATGCTTCCTCCCCAAAAAAGTTAGGAAATAAAGTTGTGTCAAATACTGGACGGAATGGTAAGTTGCAGACAGCATCTTCTTCTGTAAACGGAAGCAGAGTTAACAAACAGTCACACCATGCCCCTCGCACAGTTAAAATGGTCATCATCAAGAACAAGAATCTGATTAAGAAGAAAGTGAAAGAGGAATCAGGTTCTGCATCATGTGATCCTGCTTCAAATGGAGTTAGCAAATCTGTTCCTGGCACAGCTCGGCTGATTTGTGAAAGATGTAGGTGTGCTTTAGAACATACAAGGGTAGAAAAAAACCAAGAGATTATGGCCTTAGACTCTAATAGTCCTGGAATTGGAAATGGAGGGAACTCAAGTAATGTGCACTCTGATTCAAATAAACCTGATTTGGCATCAACTGGCGGTAATATAAGCAAAGCAGTTGCAAAGGGGGAGAAGAAGACCAAGTTAAGAGACCAACTTGAGTTTTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACTAGTACCAGCGATGAGAGCAACACGAGTGGCTCAAGTTGCGGCACTAGGCCTCACATGTCAAAGGATGTTAGGTGGGGAGCCATTCGACATGCTCAAATGCAACATGGAGTCTTGGGCTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCACAAGTTGTTTGTTTGCTATTAAGGTCATGGACATCGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTTGACCATCCATTTCTTCCCACATTGTATGTACAATTTACATCAGATAATCTCTCATGTTTGGTCATGGAGTATTGTCCAGGTGGAGATCTCCATGTTCTGCGGCAGAAGCAGCTTGGTAGATGTTTTTCGGAGCTAGCAGCAAGGTTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAGCCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCATTGAGGTGTGCTGTAAGTCCAACACTTCTGAAGTCATCTTCTGATGTCGACCCTGCAAAAATTTCTGGTCTTAGTGTACAATCAAGTTGCATTGAACCATTCTGCATTGAACCATCTTGTCAAGTTTCATGCTTCAGCCCCAGATTCCTACCTGCTTCTGCAAAAACAAGGAAATTAAAAGTCGATCCTATTGCACAGCTCAGATCACTGCCGCAGCTTGTAGCTGAGCCCACTGATGCGAGATCAAACTCGTTCGTTGGTACACACGAATACCTGGCCCCTGAGATCATCAAAGAAGAGGGGCATGGAGCTGCAGTTGACTGGTGGACATTTGGCGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGCTCTAACAATGAAGAAACATTAGCAAACGTGGTGTTGCAAAGTCTTAGATTCCCTGATGACCCATTTGTTAGTTTCGAAGCTAGGGATCTGATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCACAGAAAGGAGCTGCTGAGATTAAACAACATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGGTGTGCCATCCCACCAGAACTTCCAGAGTTTTGTGATTTTGGAGTTTTAGACACGACGCCACAAGGCAATGGTGCTAAGTATTTAGAGTGTAATGTAGGAGAACATGTAGAATTCGAGTTGTTTTAA 2616 0.4186 MGSFSGTCEIVEAKEDLCIGKGALGICQSNSQYKTSEKNKKPLVLNLEYKDNIGNDINKLFESIALKSSSKDSGLLHDGTSHKLKNTLKKPMAMGVPRSPRVGSSEPVNLKQALRDLCISKASEVAAMRRLSKSTASPRISEVGRIQTLYSSVVDETGHSGHYIAENKGCRTEISLVPEKSQSSSLDKTSQPHQTTQITSSSQAINSAWKIAVATTQLDFGTSSMQSDLACSSSKVGFQSQRVVPVQPEKQTSASSPSLYNMSESKLELPVNASSPKKLGNKVVSNTGRNGKLQTASSSVNGSRVNKQSHHAPRTVKMVIIKNKNLIKKKVKEESGSASCDPASNGVSKSVPGTARLICERCRCALEHTRVEKNQEIMALDSNSPGIGNGGNSSNVHSDSNKPDLASTGGNISKAVAKGEKKTKLRDQLEFSQSSKSSQGEYSSSTSTSDESNTSGSSCGTRPHMSKDVRWGAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSDVDPAKISGLSVQSSCIEPFCIEPSCQVSCFSPRFLPASAKTRKLKVDPIAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDDPFVSFEARDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPEFCDFGVLDTTPQGNGAKYLECNVGEHVEFELF 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02588 871 Pfam Protein kinase domain 490 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02588 871 Pfam Protein kinase domain 718 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02588 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Car03g02588 871 MobiDBLite consensus disorder prediction 376 464 - -
Car03g02588 871 Gene3D Transferase(Phosphotransferase) domain 1 714 835 - -
Car03g02588 871 Gene3D Transferase(Phosphotransferase) domain 1 573 638 - -
Car03g02588 871 PANTHER FLIPPASE KINASE 1-RELATED 1 871 - -
Car03g02588 871 SMART serkin_6 489 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02588 871 MobiDBLite consensus disorder prediction 376 408 - -
Car03g02588 871 MobiDBLite consensus disorder prediction 278 309 - -
Car03g02588 871 SUPERFAMILY Protein kinase-like (PK-like) 464 841 IPR011009 -
Car03g02588 871 MobiDBLite consensus disorder prediction 430 462 - -
Car03g02588 871 Gene3D Phosphorylase Kinase; domain 1 488 572 - -
Car03g02588 871 ProSiteProfiles Protein kinase domain profile. 489 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02588 871 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 871 - -
Car03g02588 871 CDD STKc_phototropin_like 487 839 - -
Car03g02588 871 MobiDBLite consensus disorder prediction 178 200 - -
Car03g02588 871 MobiDBLite consensus disorder prediction 272 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02588 Car-Chr3 71804779 71809413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02588 1 871 AGC Kinase Gene Family AT3G52890 51.929 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car03g02588 Pkinase 6.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02588 - K08286 mtr:MTR_7g104180 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02588 03 71804779 71809413 Car04g01989 04 23770534 23776594 ECH
Car03g02588 03 71804779 71809413 Car03g02588 03 71804779 71809413 ECH
Car03g02588 03 71804779 71809413 Car04g01989 04 23770534 23776594 PCT