Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02584 ATGGACTTTGATCTGAAACAATGGAGAAACCAGCATGAGTCAGAGGAACAACAACATCATTCTACAAAGATGCCAAAACTTCTTCTTCACTCTGAAACTCATCAACAACAATCTTCTGTTACTCCTGCTCTCCCTTTCTTTCTAGAATCCAACAACACCAAAGTCAGCAACTTGTCAGATTCAACATTACCTTCCAACACCAACAGATTCCCCAGAATGGGAAGCCATTTTAGCTTGTCTCAGTGGCAAGAACTTGAGTTACAGGCATTGATATTCAGATACATGTTAGCTGGTGCTTCTGTTCCTACTGAACTTCTTCAACCTATCAAGAAAAGCCTTATCCATTCACCTCTTCATTTTCTTCATCACCCTCTTCAACATTTTCAACCTACACCTTtgttgCAAACAGGGTATTGGGGAAGAGGAGCCATGGATCCAGAACCTGGTCGGTGCCGGAGAACCGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCCGGACAAAAGTATTGTGAACGTCACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAACTAGTAGTGCCATtggtggtggtggtggtggAtctttctctgcttcttcttctatttcttctcagcctcttactacttcattcATGAAATCTCCTTTTCATCACCTCCTTCACCTTAATGAACGTCCCTCTGGGACCAAGAATGAAGACAAGAGGATCTTATTTGAAAGCGAAGATCATGTGGGTGGGGATGGAAGATCAGGTACCCAAATGCTAAGACATTTTTTTGATGATTGGCCACGATCACTCCAAGAATCTGACAATGCTGAAAACAATGTTGGGTCATCCACATGCCTCTCAATTTCAATGCCAGGAAATAACAACACTTCTTCTTCAGATGTGTCATTGAAATTGTCCACTGGCTATGGAGAAGAACCATGTCCAAGAAATGAGAATGTGGGCCTAGAAAATGATAACCAACAATTGCAATTGAATTGGGCCGGAGGGTGGAATTCGACTAATAATCAAGTGGCTTCAATGGGTGGACCACTAGCAGAAGCATTTAGATCATCTACTTCAACTTCTTCTTCACCTACTAGTGTTTTACATCAATTGCCTCGTTCTTCCGGTTCTGAGACTAGCTACATTAGTACCTAA 1173 0.4041 MDFDLKQWRNQHESEEQQHHSTKMPKLLLHSETHQQQSSVTPALPFFLESNNTKVSNLSDSTLPSNTNRFPRMGSHFSLSQWQELELQALIFRYMLAGASVPTELLQPIKKSLIHSPLHFLHHPLQHFQPTPLLQTGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTSSAIGGGGGGSFSASSSISSQPLTTSFMKSPFHHLLHLNERPSGTKNEDKRILFESEDHVGGDGRSGTQMLRHFFDDWPRSLQESDNAENNVGSSTCLSISMPGNNNTSSSDVSLKLSTGYGEEPCPRNENVGLENDNQQLQLNWAGGWNSTNNQVASMGGPLAEAFRSSTSTSSSPTSVLHQLPRSSGSETSYIST 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02584 390 Pfam WRC 146 188 IPR014977 -
Car03g02584 390 PANTHER - 8 390 IPR031137 GO:0005634|GO:0006351|GO:0032502
Car03g02584 390 PANTHER GROWTH-REGULATING FACTOR 3 8 390 - -
Car03g02584 390 Pfam QLQ 76 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car03g02584 390 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car03g02584 390 MobiDBLite consensus disorder prediction 295 310 - -
Car03g02584 390 MobiDBLite consensus disorder prediction 295 326 - -
Car03g02584 390 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car03g02584 390 MobiDBLite consensus disorder prediction 349 390 - -
Car03g02584 390 ProSiteProfiles WRC domain profile. 145 189 IPR014977 -
Car03g02584 390 MobiDBLite consensus disorder prediction 1 23 - -
Car03g02584 390 MobiDBLite consensus disorder prediction 176 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02584 Car-Chr3 71704052 71707917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02584 1 377 GRF Transcription Factor Family AT3G52910 50.639 1.50e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Car03g02584 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02584 - - gmx:100814842 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02584 03 71704052 71707917 Car03g02584 03 71704052 71707917 ECH