Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02582 ATGATGGCTCAAAAGTACTTACACGAGCTACTAAAACAAGATCAAGAACCATTCCTTCTTAACAAATACATTTCAGATAAACGCAACCAAATCAAAAAAACCACTCCTTTTTCAAACACAATTTTACAACAACACAAAAAACCAATTCAAAATTCGAACTTCCACATAAATCTCTGTAAAAACACTTCTTGTTTTTTCTCATTTCCAGAAACACCAGAGTTCAGAAAATCACCACTTTTTGAACTAACTTCCCCAGCTAATAAAACCCCTTCTTCTCGAACAGCAACACTTCTTCTAGAAGCTGCTCTTAGGATCCATAAACATTCATCTTCTTCCAAAACAAAAACCAAAGGGTTTGGATTATTTGGGTCTTTATTCAAGAGACTCACGCAACGAAACCAGAACCGGAAACGCCAAATAGAAGGTCAAAATGTGTCTGTAAAGGATATATTGAAATGGGATTCGTCTAAAAATTTGGATTATGAGAAGAAAAACAACAACATGGTTAATGATACTGAGGTTGGGTTTGTTTGGTCGGAGGATAAATCATTGGAAATGGAAACTTCGTGTAGTGGTTACTCTTTTGTTACTGATCAAGAAGCTTGTGGTTGTTATCACTGTGCTTTCTCTGAAAGCCCTTTCCGTTTTGTTCTTCAAACGACTTCTTGCTCCGGCACCCACACGCCGGAGCTGGCATCGCCGGCGCGTCATAAAACAGAGGACAAAGAAAGTAATGGAGCTGAGGATCTCAATAAATTAAAGTCAGGGGAAGAAGAGGAAGAAGATAAGGAACAATGTAGTCCGGTCTGTGTTTTAGACCCACCATTCgaggacgatgacgaaggacatataaatgatgacgatgaagatgaagatgGTGGTGATTTTGATTTGGAGAGAAGCTATGCAATTGTACAGAGAGCAAGACAGCAAATTTTGTACAAGCTTCGCAGATTTGAGAAACTCGCAGAGTTGGATCCGATAGAGCTTGAGAAAAGAATGCTGGATCaagaagaggaagaggatgaaacatacatggaagaggatgatgaagaagaaATGGAAGTATCATCATGTAAAGAAAAGGATTTCAAAGAACTTGTTTTTGAAGCTGTTTATCTGTCAATGGTTCATGAGAGACAACAAATCCCACAAGAGTTAAAGAAACTGATATATGATGTTGTTGTGGAAGAAGAGAGAGAATTTAATAATTCATTAGAAGACATGGAAATGGTGATAAAAAAGATATGCAAGAGGCTTGAATCATGGAAAGAAGTGGAGCCTAACACAATTGATATGATGATAAAAGAGGATTTCTTTATAGAGGATGAAGGGTGGAAGAAAAATGTAGAGCAAGTAAGAAATATGGCTGGAGAGGTTGAATTTGCTATCTTTAGCATTCTAGTGGAGGAATTTTCAGAGGAATTAGTATGTTCATGTGTGTAA 1446 0.3485 MMAQKYLHELLKQDQEPFLLNKYISDKRNQIKKTTPFSNTILQQHKKPIQNSNFHINLCKNTSCFFSFPETPEFRKSPLFELTSPANKTPSSRTATLLLEAALRIHKHSSSSKTKTKGFGLFGSLFKRLTQRNQNRKRQIEGQNVSVKDILKWDSSKNLDYEKKNNNMVNDTEVGFVWSEDKSLEMETSCSGYSFVTDQEACGCYHCAFSESPFRFVLQTTSCSGTHTPELASPARHKTEDKESNGAEDLNKLKSGEEEEEDKEQCSPVCVLDPPFEDDDEGHINDDDEDEDGGDFDLERSYAIVQRARQQILYKLRRFEKLAELDPIELEKRMLDQEEEEDETYMEEDDEEEMEVSSCKEKDFKELVFEAVYLSMVHERQQIPQELKKLIYDVVVEEEREFNNSLEDMEMVIKKICKRLESWKEVEPNTIDMMIKEDFFIEDEGWKKNVEQVRNMAGEVEFAIFSILVEEFSEELVCSCV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02582 481 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 479 - -
Car03g02582 481 MobiDBLite consensus disorder prediction 338 357 - -
Car03g02582 481 MobiDBLite consensus disorder prediction 279 295 - -
Car03g02582 481 MobiDBLite consensus disorder prediction 338 356 - -
Car03g02582 481 PANTHER OS04G0572500 PROTEIN 1 479 - -
Car03g02582 481 MobiDBLite consensus disorder prediction 233 267 - -
Car03g02582 481 Coils Coil 328 348 - -
Car03g02582 481 MobiDBLite consensus disorder prediction 227 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02582 Car-Chr3 71654021 71657661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02582 4 479 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.135 3.53e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02582 - - cam:101499859 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02582 03 71654021 71657661 Car03g02582 03 71654021 71657661 ECH
Car03g02582 03 71654021 71657661 Car04g01987 04 23725693 23730814 PCT