Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02581 ATGCCTGAAAACTACACTGCTGatcatgcatcatcatcctcatcctcatcgtcGACCAAAGTTTCTACCGGCCGTCACCCTCTTTACCGAGGAGTGAGGCGTAGAAACAGTGGAAAATGGGTGTCTGAAATTCGTGAACCTAAAAAACCTAACAGAATTTGGTTAGGAACATTTCCAACACCTGAAATGGCAGCTATTGCTTATGACGTAGCTGCACTTGCTCTTAAGGGAAAAAATGCAGAATTGAATTTTCCTAATTCTTCGTCTTCTTTACCTGTTCCGGCTTCTTCCTCCGCTCGCGATATTCAGTTGGCTGCAGCTAGTGCTGCAGCTGCTGTAGGTGCAGCTAAAGACGCACTCGCGACCGAAGGAAACCATGCCGTTGAACTGCAAGACTTTTTTTCAAGTGGAaatgaaaacaataataataataataatattaatGAGTTTATTGATGAGGATTTGATCTTTGATATGCCTAATGTTTTGGTTAATATGGCTGAAGGAATGCTAATTAGTCCTCCTCGTTTTGATCACTTTGAAACTGATTATCACTATGATGTGCAAGAAAATATGTGTGATGATCCAAACCTCTGGAGTTATCCTTATTTCCCATGA 618 0.3819 MPENYTADHASSSSSSSSTKVSTGRHPLYRGVRRRNSGKWVSEIREPKKPNRIWLGTFPTPEMAAIAYDVAALALKGKNAELNFPNSSSSLPVPASSSARDIQLAAASAAAAVGAAKDALATEGNHAVELQDFFSSGNENNNNNNNINEFIDEDLIFDMPNVLVNMAEGMLISPPRFDHFETDYHYDVQENMCDDPNLWSYPYFP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02581 205 MobiDBLite consensus disorder prediction 1 24 - -
Car03g02581 205 Gene3D AP2/ERF domain 28 86 IPR036955 GO:0003700|GO:0006355
Car03g02581 205 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Car03g02581 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 9 202 - -
Car03g02581 205 CDD AP2 27 87 IPR001471 GO:0003700|GO:0006355
Car03g02581 205 MobiDBLite consensus disorder prediction 1 26 - -
Car03g02581 205 PIRSF PTI6 1 199 IPR017392 GO:0003700
Car03g02581 205 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Car03g02581 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 202 - -
Car03g02581 205 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Car03g02581 205 PRINTS Ethylene responsive element binding protein signature 67 87 IPR001471 GO:0003700|GO:0006355
Car03g02581 205 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Car03g02581 205 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02581 Car-Chr3 71645136 71646467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02581 18 202 AP2-EREBP Transcription Factor Family AT2G36450 63.441 2.08e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car03g02581 AP2 2.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02581 - - gmx:100799620 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02581 03 71645136 71646467 Car03g02581 03 71645136 71646467 ECH
Car04g01986 04 23716040 23716644 Car03g02581 03 71645136 71646467 PCT