Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02580 ATGGAAATGGATGACAatcatcatcatcatcatcaacaacaCTATGGTATCACTGATCTGAGACAACTCATGAATGGACCAAGAATAACATCAACTACAACTAACCATTTCTCCACCGCCGAACTCTTCCCTTCCGGTAACAACCCCACACAATTTGATATCATGATGTTTGGTCGTCCAGACATAATGCCTCCTCGTTCTCTTCATGACTTTGTTTCTACCGATTCTGTTACTCTTCCTTCTGCTTCAACTCCTTCACTTGAAGCTGTTCTTGATTCTTCCACTGGACGATGGCCTAGACAAGAGACTCTCACTCTTCTTGATATCAGATCTCGTCTTGATTCTAAATTCAAAGAAGCTAATCAAAAGGGTCCTCTTTGGGATCAAATTTCTAGGATAATGTATGAAGAACATGGCTACCAGAGAAATGGAAAAAAATGCAGAGAGAAATTTGAGAATCTATACAAATACTACAAGAAAACAAAGGAAGGTAGAGCAGGAAGACAAGATGGAAAACATTATAGATTCTTTCGTCAACTTGAAGCGTTATATGGTACTGAAAACATTAACAATAACCCTTCTTTATCTTCATTACCAGAAAACAACAACAACCTTATTTTCTACAACAATACTTCTCAAACAAATATTCAAGAAATGTTTCATTCTCATAGTCTAAGTCTAACAAACTCAACTGAATTTTACACATCATCtgatgatgatgatgatgatgaAAACGATCATACTCATAGCACTGAGGGACTGAAAGAGAATGAATGTTCCATGGagaagaagaaaaagaggacggtgagtggaagaagaagaagaagTGGTTGGAAGGTAAAGATAAAAGACTTCATTGATTCACAAATGAAGAAGCTTGTTGAGAAACAAGAGGAATGGTTAGATAAACTAACAAAAACATTGGAACAGAAGGAAAAGGAAAGAGGG 948 0.3333 MEMDDNHHHHHQQHYGITDLRQLMNGPRITSTTTNHFSTAELFPSGNNPTQFDIMMFGRPDIMPPRSLHDFVSTDSVTLPSASTPSLEAVLDSSTGRWPRQETLTLLDIRSRLDSKFKEANQKGPLWDQISRIMYEEHGYQRNGKKCREKFENLYKYYKKTKEGRAGRQDGKHYRFFRQLEALYGTENINNNPSLSSLPENNNNLIFYNNTSQTNIQEMFHSHSLSLTNSTEFYTSSDDDDDDENDHTHSTEGLKENECSMEKKKKRTVSGRRRRSGWKVKIKDFIDSQMKKLVEKQEEWLDKLTKTLEQKEKERG 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02580 316 Pfam Myb/SANT-like DNA-binding domain 97 183 IPR044822 -
Car03g02580 316 ProSiteProfiles Myb-like domain profile. 96 155 IPR001005 -
Car03g02580 316 PANTHER - 34 315 - -
Car03g02580 316 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 34 315 - -
Car03g02580 316 CDD GT1 97 162 - -
Car03g02580 316 MobiDBLite consensus disorder prediction 247 265 - -
Car03g02580 316 Gene3D - 98 160 - -
Car03g02580 316 Coils Coil 294 314 - -
Car03g02580 316 MobiDBLite consensus disorder prediction 232 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02580 Car-Chr3 71628931 71630309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02580 3 315 Trihelix Transcription Factor Family AT5G03680 44.414 1.30e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car03g02580 Myb_DNA-bind_4 5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02580 - - cam:101499561 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02580 03 71628931 71630309 Car03g02580 03 71628931 71630309 ECH
Car03g02580 03 71628931 71630309 Car04g01984 04 23672857 23675465 PCT