Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02566 ATGAACACATCACTAGCATTACCCTTAACCTTGTTATTTCTCTTCACAACACAGAGTGCAACTGCACCGCAGAATGATACGCAAGCCCTCACCGAATTCCGTCTCCAAACAGACTCACACGGCTACCTCGTCAGTAATTGGACCGGAGAAGACGCCTGCAACGCTGCGTGGCGCGGCGTCGAATGCTCCCCAAACGGCAGAGTTGTTGCTCTCTCTGTTCCTTCCTTCAATCTCCGAGGTCCCGTTGATTCTCTCTCAACGCTAATCTACTTGCGTTTCCTTGATCTTCACGATAACCGCTTGAACGGAACCATTGTTCCTCTTTTAAACTGCACTGACCTTGAACTACTTTACCTCTCTGGCAATGACTTCTCCGGCGAGATACCGCCGGCGATATCCTCTTTACGTCTTCTTATCAGACTCGATATCTCCGACAACAACATCCACGGAGAAATTCCAAAAGAAATAACGAAGTTGAATCATCTCCTCACTCTCCGTTTACAGAACAACGAACTCTCCGGCGAAGTTCCCGATCTTTCTTCTTCACTCGTCAATCTCAGAGAACTAAATATCACCAACAACGAACTCCAAGGAAACTTACCCGATGCAATGCTCAATAAATTCGGAAACAAAAGCTTCTCCGGCAACGACGGTCTTTGTGGATCGGCGCCTTTACCGAATTGTTCTGTCACCGAAACATCTCCTCCTTCGGATGATGAAATTGTTCCTTCAAACCCTAGCTCGTTACCACAAACAAGTAGTAACGGAACAATTGCATCTGAAACTCATTCGAGAAAACGGAAATCGCTGAGTCCGGGAGGAATTgtggcggttgtggtggcggtttgtgtggtggcagtagtggcggCTTCATTCGCGGTGGCTCATTGTTGCGGAAGAGGAAAAAGGTCTAATTCAACGGTGGGGATGGATAGTGAGATTGGGAAGAGGAAAAGCGAGAGTAGCAGTGGAAGTGAGAAGAAAGGTTATGGGGGTGTGGATAGTAATAGTGATGGAAACACTGAAACAGAGAGAAGTAAATTAGTGTTTTTCGATAGAAGGAGTGAGTTTGAGTTGGAGGATTTGCTACGAGCATCGGCGGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTCTATAGGGCTGTTCTTGATGATGGATGTACTGTTGCTGTTAAGAGACTTAAGGATGCTAATCCATGTGATAGGAATCAGTTTGAACAGTATATGGATGTTGTTGGAAAGCTTAGACACCCTAATGTTGTTAGACTCAAAGCTTATTATTATGCTAAGGAAGAAAAACTTCTTGTCTATGATTATCTTTCCAATGGAAGCTTGCATTCTCTTCTTCATGGGAACCGTGGTCCGGGAAGGATTCCGTTAGATTGGACAACAAGAATAAGCTTGGTGTTGGGGGCAGCAAGAGGTCTTGCAAGGATTCATGGAGAGTATAGTGCAGCCAAAATACCTCATGGGAATGTGAAATCTTCCAATGTACTACTTGACAAGAATGGTGTTGCTTGCATAGGTGACTTTGGTTTGTCACTTTTGTTGAATCCTTCTCATGCGGTTGCGAGGTTGGGTGGGTACAGAGCTCCCGAACAGGCAGAGGCAAAGAAGTTATCACAAGAGGCAGACGTGTATGGTTTCGGCGTGTTGGTGTTGGAAGTTTTGACAGGAAAAGTTCCTTCCTCTCAATACTCTTCTCCCGTAGGAGTTCGTCCTTATGTGGAATTTGAGGAACAAGAAACCGATCTTCCTAAATGGGTTCGGTCGGTTGTGAAGGAAGAGTGGACATCAGAGGTGTTTGATCAAGAACTATTGAGGTACAAGAACATTGAGGAGGAGCTTGTTTCAATGTTGAATGTTGGGTTGGCTTGTGTTGTTTTACAACCTGAGAAGAGGCCAACTATGTTGGAAGTTGTTAAGATGATTGAGGATATTAGGGTGGAACAATCTCCTTTAAGAGAGGATTATGATGAATCGCGTAATTCACTTTCACCTTCACTTGCCACTACTGAAGATTGCATAGCTTAA 2034 0.4371 MNTSLALPLTLLFLFTTQSATAPQNDTQALTEFRLQTDSHGYLVSNWTGEDACNAAWRGVECSPNGRVVALSVPSFNLRGPVDSLSTLIYLRFLDLHDNRLNGTIVPLLNCTDLELLYLSGNDFSGEIPPAISSLRLLIRLDISDNNIHGEIPKEITKLNHLLTLRLQNNELSGEVPDLSSSLVNLRELNITNNELQGNLPDAMLNKFGNKSFSGNDGLCGSAPLPNCSVTETSPPSDDEIVPSNPSSLPQTSSNGTIASETHSRKRKSLSPGGIVAVVVAVCVVAVVAASFAVAHCCGRGKRSNSTVGMDSEIGKRKSESSSGSEKKGYGGVDSNSDGNTETERSKLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCDRNQFEQYMDVVGKLRHPNVVRLKAYYYAKEEKLLVYDYLSNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSAAKIPHGNVKSSNVLLDKNGVACIGDFGLSLLLNPSHAVARLGGYRAPEQAEAKKLSQEADVYGFGVLVLEVLTGKVPSSQYSSPVGVRPYVEFEEQETDLPKWVRSVVKEEWTSEVFDQELLRYKNIEEELVSMLNVGLACVVLQPEKRPTMLEVVKMIEDIRVEQSPLREDYDESRNSLSPSLATTEDCIA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02566 677 SUPERFAMILY Protein kinase-like (PK-like) 368 644 IPR011009 -
Car03g02566 677 Gene3D Transferase(Phosphotransferase) domain 1 440 668 - -
Car03g02566 677 MobiDBLite consensus disorder prediction 227 260 - -
Car03g02566 677 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Car03g02566 677 SUPERFAMILY L domain-like 23 207 - -
Car03g02566 677 MobiDBLite consensus disorder prediction 325 341 - -
Car03g02566 677 MobiDBLite consensus disorder prediction 302 341 - -
Car03g02566 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 668 - -
Car03g02566 677 ProSiteProfiles Protein kinase domain profile. 364 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02566 677 Pfam Protein kinase domain 368 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02566 677 PANTHER LRR RECEPTOR-LIKE KINASE 1 668 - -
Car03g02566 677 Gene3D Ribonuclease Inhibitor 22 207 IPR032675 -
Car03g02566 677 MobiDBLite consensus disorder prediction 227 267 - -
Car03g02566 677 Gene3D Phosphorylase Kinase; domain 1 333 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02566 Car-Chr3 71513490 71516378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02566 19 673 Receptor kinase-like Gene Family AT2G36570 64.829 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car03g02566 Pkinase 3.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02566 - - gmx:100808402 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02566 03 71513490 71516378 Car03g02566 03 71513490 71516378 ECH
Car03g02566 03 71513490 71516378 Car04g01967 04 23359686 23363528 PCT