Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02564 ATGGAAACCAATGGACCAAGCAGTGGAATATTTCCCACCATCAATAATGGATTTCTAGGACTAGAAAACCCTTTAAaacaacaacaacaacaacaacaaaaccttcaaaatcaacaCACTTTACATCATCACCAAATGGTTTCATACACCAACCATCATGACAATGATCAACCAATCAAACAGAACTACCCTTATTCATCCAAAACCAACAAGCCACAACAAATCACACTAAGTGATGAAGATGAACCATGTTTTGGAGCAGAAGAAACAACATCAAGTGACCCAAAAAGAAAAGGGTCACCATGGCATAGAATGAAATGGACAGATAGCATGGTAAGACTCTTAATCATGGCAGTTTATTACATTGGTGATGAAGCAGGTGGTTCAGAAGGAATCATCATCAATGACAAAAAGAAATCTACAACTGGTTTGTTACAAAAGAAAGGTAAATGGAAATCAGTTTCTAAAGGGATGATGGAAAAAGGTTACTATGTTTCACCTCAACAATGTGAAGACAAGTTCAATGATTTGAACAAAAGGTTCAAAAGGGTCAATGATATACTTGGAAAAGGAACAGCTTGTAGAGTTGTTGAGAATCAAAGTTTGTTGGATACCATGGATTTGACACCAAAGATGAAAGAAGAAGCTAGAAAACTTTTGAACTCAAAGCACCTTTTTTTTAGAGAAATGTGTGCTTATCATAATAGTTGTGGTCATGGAAGTAACAATTTGcaacaacaatcctcaattgaagctcaaccacaacctcaacaacatcatcaacaacaacaaAAGTGTTTGCATTCATCAAATGGAATGTTGAAATTAAAACGGagaagtggagaagaagaagaagaagaagacgaagatgatgaatgggaagaggagaatgattctgaagaagaagaagaagaagaagatgaaTTATCATTTGAAGGTGGTTCTGGCTCAAAGGGTCATCATGATCAAGAAGATGAGAATAATAATAATATAGATCATATAAGAAAGAAAACAAGAAAAGTTTCATCACATTTGATGCAACAATTGAGTAGTGAAGTGATGAATGTGTTGCAAGATGGAGTGAAGAGTAACTGGGAGAAAAAGCAATGGATGAAGAAAAGGGAGGTGCAATTAGCAGAACAACAAATAAACTATCATGTGGAAGCATTTGAGATTGAAAAACAAAGGTTGAAATGGGCAAAGTTTAGTGGTAACAAAGAAAGGGAAATAGAGAGACATAAACTTGAAAATGAAGGGAAGAGGTTGGAAATTGATAGAATGGTTTTGGTTCTTAGACAAAAGGAGATTGAATTGCAAAACACTCAACAGCAACAGCAACAACATTCTTCTACTTAG 1356 0.3031 METNGPSSGIFPTINNGFLGLENPLKQQQQQQQNLQNQHTLHHHQMVSYTNHHDNDQPIKQNYPYSSKTNKPQQITLSDEDEPCFGAEETTSSDPKRKGSPWHRMKWTDSMVRLLIMAVYYIGDEAGGSEGIIINDKKKSTTGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRFKRVNDILGKGTACRVVENQSLLDTMDLTPKMKEEARKLLNSKHLFFREMCAYHNSCGHGSNNLQQQSSIEAQPQPQQHHQQQQKCLHSSNGMLKLKRRSGEEEEEEDEDDEWEEENDSEEEEEEEDELSFEGGSGSKGHHDQEDENNNNIDHIRKKTRKVSSHLMQQLSSEVMNVLQDGVKSNWEKKQWMKKREVQLAEQQINYHVEAFEIEKQRLKWAKFSGNKEREIERHKLENEGKRLEIDRMVLVLRQKEIELQNTQQQQQQHSST 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02564 451 MobiDBLite consensus disorder prediction 283 310 - -
Car03g02564 451 Coils Coil 405 451 - -
Car03g02564 451 Gene3D - 107 183 - -
Car03g02564 451 Pfam Myb/SANT-like DNA-binding domain 104 232 IPR044822 -
Car03g02564 451 MobiDBLite consensus disorder prediction 51 101 - -
Car03g02564 451 MobiDBLite consensus disorder prediction 242 331 - -
Car03g02564 451 Coils Coil 283 303 - -
Car03g02564 451 MobiDBLite consensus disorder prediction 311 331 - -
Car03g02564 451 MobiDBLite consensus disorder prediction 51 77 - -
Car03g02564 451 MobiDBLite consensus disorder prediction 242 270 - -
Car03g02564 451 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 451 - -
Car03g02564 451 PANTHER F16F4.11 PROTEIN-RELATED 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02564 Car-Chr3 71499170 71501108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car03g02564 Myb_DNA-bind_4 9.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02564 - - aprc:113863792 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02564 03 71499170 71501108 Car03g02564 03 71499170 71501108 ECH
Car03g02564 03 71499170 71501108 Car04g01964 04 23330678 23332201 PCT