Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02552 ATGAATGTTCCATATCCTTTGAGCACAGACCCCAACTGTGGCGATTCCTACTATAGGCTTCGTTGCGATCCCCATTCTCAAAAGCTTTACTTTGACACTCTCAATGGCAGTTCCTATGTTGTACTCAGAATCATGTCTTCAATCCAGCGTATCGTGGTGCAGCCACCACCTTGGTTACCTGGTTCATGTGTCACACAAGACATGCCGGTAAGCAACGGTATTTGGTTAAATCAGTCCCTTCCTTTCAAAATAACTTCATCTAACACAGTGTTCCTCTTCAACTGTTCCCCTCGCCTCTTGGTTTCTCCTCTTAACTGCACTTCTTCTAGTACTTGTCATCGTTACTTGGAAAATTCAGGTCACGTTGACACAAAGCGAGCACTTGAGTGTGCCAGCGGTCTTCACCCTTGTTGCACCTTTGTTGCTGGTGGTATGCCTTCGGCTTACAAGATTCGTCTTCACGATTCCGGTTGCAGAGCATTCAGAAGCATCCTTCATTTGGACCAAGACAAACCTCCTAATCAGTGGGAGGAAGGCTTAGAGATTCAATGGTCTCTTCCACCTGAACCTGTCTGTAGGACACAAAGGGATTGCTCTAGAGACTCTAAGTGTTCCCCTTCTGGTAGATATGCAGTCTTTCGCTGTTTTTGTAATAAAGGATTTCATTGGGATCCTTTTGCAGCAACCTGTGTAAGGTACAAGAGAAAATCCAAATGGAAAACCAGCTTGGTTGTCTCAATAGGGGTTATTGCTTTTTTCTCATTGGCTGTGGTTCTTGTCATCATCACAAAGTCCTTCAAATTCAAACACTATAACAATAGGGAGAATCAGGCCAAGGAAAGAGAAATTGTTCTCAAATCAAACACTGGTGAGAAACCTTACAGGATGTTTCAGCTGAAAGAGTTGAAGAAAGCAACAAACAGTTTCTCACAAGACAGGATCCTAGGAAGTGGTGGCTTTGGTGAAGTTTACAAAGGTGAACTACAAGATGGAACGTTGGTAGCTGTCAAGAAAGCTAGAGTTGGTAACCTTAAAAGCACACAACAAGTGCTTAATGAGGTTTCAATACTTTCTCAAGTCAATCACAAGAACCTAGTCAGACTCTTGGGCTGCTGTGTGGAATCTGATCAGCCTTTGATGATTTATGAGTATATCTCAAATGGCACCCTCTATGACCATATTCATGATTTTGGACTCTCGAGATTGGCTAACCCGGGACTTAGTCACGTGTCTACGTGTGCTCAGGGGACACTAGGGTACTTAGATCCAGAATATTATCGTAACTATCAGTTAACTGATAAAAGTGATGTTTATAGCTATGGAGTTGTGCTGCTAGAGCTTTTGACTTCACAGAAAGCGATAGACTTCTCTCGTGATCAAGATGATGTCAACTTGGTAATTCATGTGAGTCAATATGCAAGCAATGGTGCAATCATGCAAGTGGTTGATCAAAGGCTTCTTCTTCTATCTTTGGAACCATCAAGTGGTAAATTGATCACAAGCATAAGACTTTTTTGGGAGCTTGCACATGATTGTCTTAGGGAGAAGAAAGTTGACAGGCCTTGTATGAGGGATATTGTCGAACGCCTCCTAAGCATaattaggattgaagatcaagagtga 1623 0.4202 MNVPYPLSTDPNCGDSYYRLRCDPHSQKLYFDTLNGSSYVVLRIMSSIQRIVVQPPPWLPGSCVTQDMPVSNGIWLNQSLPFKITSSNTVFLFNCSPRLLVSPLNCTSSSTCHRYLENSGHVDTKRALECASGLHPCCTFVAGGMPSAYKIRLHDSGCRAFRSILHLDQDKPPNQWEEGLEIQWSLPPEPVCRTQRDCSRDSKCSPSGRYAVFRCFCNKGFHWDPFAATCVRYKRKSKWKTSLVVSIGVIAFFSLAVVLVIITKSFKFKHYNNRENQAKEREIVLKSNTGEKPYRMFQLKELKKATNSFSQDRILGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTQQVLNEVSILSQVNHKNLVRLLGCCVESDQPLMIYEYISNGTLYDHIHDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSRDQDDVNLVIHVSQYASNGAIMQVVDQRLLLLSLEPSSGKLITSIRLFWELAHDCLREKKVDRPCMRDIVERLLSIIRIEDQE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02552 540 Pfam Protein tyrosine and serine/threonine kinase 311 395 IPR001245 GO:0004672|GO:0006468
Car03g02552 540 Gene3D Phosphorylase Kinase; domain 1 268 382 - -
Car03g02552 540 SUPERFAMILY Protein kinase-like (PK-like) 290 530 IPR011009 -
Car03g02552 540 Gene3D Transferase(Phosphotransferase) domain 1 383 540 - -
Car03g02552 540 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 395 IPR045274 GO:0007166
Car03g02552 540 ProSitePatterns Protein kinases ATP-binding region signature. 315 338 IPR017441 GO:0005524
Car03g02552 540 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 2 395 - -
Car03g02552 540 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 395 540 - -
Car03g02552 540 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 395 540 IPR045274 GO:0007166
Car03g02552 540 ProSiteProfiles Protein kinase domain profile. 309 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02552 540 ProSitePatterns EGF-like domain signature 2. 215 230 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02552 Car-Chr3 71411443 71413230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02552 1 540 Receptor kinase-like Gene Family AT5G02070 34.887 9.55e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car03g02552 PK_Tyr_Ser-Thr 1.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02552 - - gmx:100804678 855.899