Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02546 ATGGACACAGGAGAGTTGGTACCACCTTGGCTTGAACCATTGCTAACAACACCGTTTTTCAATGTGTGTCGGATTCACGCTGACGCCGCTAGAAATGAGTGTAACATGTATTGCTTAGATTGCAATGGCGATGGTGCCTTTTGTTTTTATTGTCGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGATAAGAAGATCTTCGTATCATGATGTAGTGAGGGTGTCAGAAATTCAGAAAGTGTTGAACATAAGTGGAGTACAAACATATGTGATAAATAGTGCTCGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGAAAAGGAGTTGCTCACATTTGTGAGATTTGTGGAAGGAGCCTGTTGGATTCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGCTTTGGTTTGGATGGTAAGAATGAAGCAATGAGAATGGAAGGGGTGTCAAGTAGAACAACAGAAGAAGAATTGCGTGAAAGCTCAACACAAGATATGTATCCTGTCACGCCTCCTCCACCTCCTTTAAATGCAAGGAGAAGAAAAGGTATTCCTCATAGGGCACCTTTTGGATCCTAA 615 0.4081 MDTGELVPPWLEPLLTTPFFNVCRIHADAARNECNMYCLDCNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLNISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFGLDGKNEAMRMEGVSSRTTEEELRESSTQDMYPVTPPPPPLNARRRKGIPHRAPFGS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02546 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 203 - -
Car03g02546 204 MobiDBLite consensus disorder prediction 158 204 - -
Car03g02546 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 203 - -
Car03g02546 204 Pfam PLATZ transcription factor 65 136 IPR006734 -
Car03g02546 204 SUPERFAMILY B-box zinc-binding domain 20 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02546 Car-Chr3 71368522 71370827 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car03g02546 PLATZ 3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02546 - - gmx:100803083 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02546 03 71368522 71370827 Car04g01957 04 23202857 23204762 PCT