Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02524 ATGTTATATTCATGGCTATGTATGAAGAGCTATGTGATCATAAAAGGATCTCGTTTCATCTGGAGATTCCAGATGACCTGCAAGGAACAGAAGGAGAGATGTCTATGTCATTTGATGGATGGGGAACCGGTGCCGATGGAGGAGGAACGGTTGCCGCTGTTTGCAATGATGGGTGACGATGATATACTCGATCGAGCCGAGGAAATGAGTCCAAACAACTATACTTTGGTCAAGTCTCCCGCTGAGAGAAACAGAACTTTCAAAGAGTTCAGTTTCAGAGATCTTCCcttggaagctattgttagtatgtatactgacgaatgtagtgagctctttggggctcgtgctaggagaaccttgaagagagctgatgctcgtgctCGTGCTAAGAAAGCATTCGAAAGAACTTGTGTTGTCTCGGAACCGAAAACAAAGTACACTGTTATTCTCAAAAAGATTTTTAAAGTAAAAAAGGATGCACCACCCGGTGAAAAACCAATGGCCATCAAAACGCATTTAAGAGACCTTCTTATTGTACCTGAGATGATTGGCAGCATCCTTTAG 564 0.3528 MLYSWLCMKSYVIIKGSRFIWRFQMTCKEQKERCLCHLMDGEPVPMEEERLPLFAMMGDDDILDRAEEMSPNNYTLVKSPAERNRTFKEFSFRDLPLEAIVSMYTDECSELFGARARRTLKRADARARAKKAFERTCVVSEPKTKYTVILKKIFKVKKDAPPGEKPMAIKTHLRDLLIVPEMIGSIL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02524 187 SUPERFAMILY Ribosomal protein S19 145 186 IPR023575 GO:0003735|GO:0005840|GO:0006412
Car03g02524 187 Gene3D 30s Ribosomal Protein S19; Chain A 77 187 IPR023575 GO:0003735|GO:0005840|GO:0006412
Car03g02524 187 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 79 186 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car03g02524 187 PANTHER 40S RIBOSOMAL PROTEIN S15 79 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02524 Car-Chr3 71139655 71140218 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02524 83 187 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 41.905 3.93e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02524 K02958 - fve:101295166 90.8929