Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02520 ATGGTAGCTACAAAAAGCTTCACCTACCATCTTCTCACAGGTCGTTGGTTCATGTTATTTGCTTCTTCACTAATCATGTCTGTCGCAGGTGCAACCTACATGTTCGGTCTTTACTCTAACCAAATCAAAACCTCTTTATCCTACGACCAAACTACTCTTAACTTACTTAGTTTCTTCAAAGACCTTGGTGCCAATGTTGGTGTTATTTCCGGTTTGATCAATGAAATCACACCACCTTGGGTTGTTCTCTCTACCGGTGTCATCATGAATTTCTTTGGTTACTTCATGATATGGCTTTCTGTTACTAAAAAAATTCATAAACCCAAAGTTTGGTTAATGTGTCTTTATATTTGTATTGGTGCAAATTCTCAAACTTTTTCTAACACGGGTGCTTTAGTTACCTGTGTTAAGAATTTTCCTAATAGTCGTGGTAGTGTTTTAGGTTTTTTGAAAGGTTATGTTGGTTTAAGTGGTGCTATAATCACACAAATTTATCATAGTTTATATTATGATTATGATGATGAAAATAATGTTCAAGCTCTTATTTTACTTATTGCTTGGCTTCCTGCTGCTGTTTCTTTTCTTTTTCTTCCAACTATTAGGATATTGAAATTGAATCAACAACAATTTTCAAAAGAGAGTAATTTTTTTTATAATCTTCTTTATATTTCACTTGGTCTTGCTTTGTTTCTCATGGTTTTGATTATTGTCCAAAATAAGTTTAGTTTCTCAAGGATTGAGTATGTAGTTGGTGGAGTTGGTGTTATTTTCTTCCTACTTCTTCCACTTGTTGTAGTTTTTAGAGAGGAATTTAAGCTCTTGAAGGACAATTCTATTTCTCAATTGAAAGTTATCAATGAACTTCCACATGGGAATATGTCATCACATGGACAAGAAATGGACGTGCCAAAAATAACATCAACTATTAAAACAAATTTGGAGAACAAAAATTCTTGTTTCAAGACTCTGTTTAAATCTCCAAATAGAGGTGAAGACTACACAATTTTGCAAGCTTTGTTTAGTATTGACATGTTGATCCTCTTTATAGCAACAACTTTTGGTGTTGGTGGAACATTAACAGCAATTGATAACTTAGGGCAAATTGGTCATTCATTAGGATATCCTAGTAAAAGTACTACAACTTTTATGTCACTAGTGAGTATATGGAACTATCTAGGACGAGTTGCGGCGGGTTATAGTTCAGAAATCTTGTTAAACAAATACAAAATCCCTCGTCCATACTTGCTCACTACTGTTATGCTTCTATCTTGTGTTGGTCATATTCTAATAGCTCTTGAAATTTTTGGATTGAAATACTACTCAACTTTGTACAATTTTGGAGCTGTGGCAAGTCCTGTGGGATCTTACATATTAAATGTGAGACTGACTGGTTATTTATATGATAAAGAAGCTTTGAAACAGTTGGAGAATAATGGACTAAAGAGACAAGAAGGGAAGGACTTAACTTGTGTTGGTGTAGAGTGTTACAAGATGGCTTTTATTATTATCACAACATCAACATTAATTGGATGTTTTGTTTCTTTTATTTTGGTGCTTAGGACAAAGGAATTTTACAAAGGAGATGTATTTAGAAAGTACAGGGCGGAACTTGAAGCAGCTGAGGCTGAGAAGAAGATTGTGAAAACTAGTGATACTCTATTTGAAAGTGAAGACATCTAA 1680 0.3387 MVATKSFTYHLLTGRWFMLFASSLIMSVAGATYMFGLYSNQIKTSLSYDQTTLNLLSFFKDLGANVGVISGLINEITPPWVVLSTGVIMNFFGYFMIWLSVTKKIHKPKVWLMCLYICIGANSQTFSNTGALVTCVKNFPNSRGSVLGFLKGYVGLSGAIITQIYHSLYYDYDDENNVQALILLIAWLPAAVSFLFLPTIRILKLNQQQFSKESNFFYNLLYISLGLALFLMVLIIVQNKFSFSRIEYVVGGVGVIFFLLLPLVVVFREEFKLLKDNSISQLKVINELPHGNMSSHGQEMDVPKITSTIKTNLENKNSCFKTLFKSPNRGEDYTILQALFSIDMLILFIATTFGVGGTLTAIDNLGQIGHSLGYPSKSTTTFMSLVSIWNYLGRVAAGYSSEILLNKYKIPRPYLLTTVMLLSCVGHILIALEIFGLKYYSTLYNFGAVASPVGSYILNVRLTGYLYDKEALKQLENNGLKRQEGKDLTCVGVECYKMAFIIITTSTLIGCFVSFILVLRTKEFYKGDVFRKYRAELEAAEAEKKIVKTSDTLFESEDI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02520 559 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 433 552 - -
Car03g02520 559 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 433 - -
Car03g02520 559 Coils Coil 530 550 - -
Car03g02520 559 PANTHER MFS TRANSPORTER 433 552 - -
Car03g02520 559 PANTHER MFS TRANSPORTER 3 433 - -
Car03g02520 559 Pfam Nodulin-like 15 267 IPR010658 -
Car03g02520 559 SUPERFAMILY MFS general substrate transporter 16 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02520 Car-Chr3 71105712 71107478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02520 3 536 Nodulin-like Gene Family AT2G39210 58.217 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02520 - - gmx:100797779 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02520 03 71105712 71107478 Car04g01597 04 16473980 16476050 ECH
Car03g02520 03 71105712 71107478 Car03g02520 03 71105712 71107478 ECH