Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02507 ATGTCAAAAGAATCTGAGGAGATAAAGACTATTGAACAGTGGAAATGGTCTGAAATGCAAGGTCTTGAGCTTGTAGGGCGTGATGATGATGTTGATAATACTCACAACAATTCTGAGTCTTTTAAAGGAAACCTACCAACAGTAACAGAGGAAGGTGCTACTGCTACTGTTATTGATTCTCAGCAACATCAAGTTTCAAAGGAAATGGTGGAAACATCAGAACCAAATAAAGATGGTGGTATTGAGGAGAAGAAGATTAAGACTGAGAGTGTTCCTTCTGTTGGGTTTGGAGAGCTTTTCAGATTTGCTGATGGGTTGGATTATATTCTTATGACAATTGGAACTGTTGGAGCAATTGTTCATGGTTGTTCTTTGCCTATTTTCCTTAGATTCTTTGCGGATCTTGTTAACTCTTTTGGGTCTAATGCTAATAATTTGGACAAGATGACACATGAAGTTGTCAAGTATGCATTTTACTTCCTTGTGGTTGGTGCTGCTATTTGGGCATCTTCATGGGCAGAGATTTCTTGTTGGATGTGGACCGGAGAGCGACAATCAACCAAGATGAGGATCAAGTACTTAGAAGCTGCATTGAAACAAGACATTGAGTTCTTTGACACCGAGGTTCGAACTTCTGATGTTGTTTTTGCCATCAACACTGATGCTGTCATGGTCCAGGATGCCATTAGTGAGAAGTTGGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGCTTCACTGCTGTTTGGCAATTGGCTTTGGTTACTCTTGCTGTAGTCCCTATGATAGCTGTGATCGGAGCTATTCACACCACCACTTTGGCTAAGCTTTCTAGTAAGAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTAGAACAGACAGTCTTGCAAATACGAGTAGTGCTGTCTTTCGTGGGGGAGTCCCGAGCACTACAAGGTTACTCATCAGCCTTGAAGGTTGCTCAGAAGCTTGGCTACAAAACTGGATTAGCAAAGGGAATGGGATTAGGCGCTACTTACTTTGTTGTGTTCTGCTGTTATGCACTTCTGCTATGGTATGGAGGCTATCTAGTAAGACATCACTACACCAATGGAGGACTTGCCATTGCAACCATGTTTGCTGTCATGATTGGTGGATTGGGTTTGGGGCAGTCTGCACCTAGCATGGCTGCATTTACAAAGGCGAGGGTTGCAGCTGCGAAGATTTTCCGGATAATTGATCACAAACCTAATATAGACAGAAACAGTGAATCTGGGTTGGAATTGGAGACAGTTACTGGACTCGTGGAGCTGAAAAATGTGAACTTTTCTTACCCATCGAGGCCTGAGGTTCTGATCCTCAATGATTTCTCCTTGAATGTTCCTGCTGGAAAAACCATGGCTTTGGTTGGTAGCAGTGGCTCTGGCAAGAGCACTGTTGTTTCCCTTATTGAGAGATTCTATGACCCAACTTCAGGACAAGTTATGTTGGATGGACATGACATTAAAACTTTGAAGCTTAAATGGTTGAGGCAACAGATAGGACTAGTGAGCCAAGAGCCGGCTTTGTTTGCTACCACGATTCGAGAAAATATACTCTTGGGAAGGCCTGACGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGGTTTGAAACTCAGGTAGGAGAAAGAGGGCTACAACTTTCTGGAGGgcaaaaacaaagaatagcaatagcaagggcaatGCTAAAAAACCCTGCAATTCTTCTCCTCGATGAGGCAACAAGTGCACTTGACTCTGAATCAGAAAAACTGGTGCAAGAAGCGCTTGACCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGTAAAGCTGACCTCGTAGCAGTGATTCAACAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAACTCTTCTCCAAAGGTGAAAATGGTGTCTATGCCAAGCTTATTAAAATGCAGGAGATAGCACATGAAACTGCTATGAATAATGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCGCCGATAATTGCCAGGAATTCTTCTTATGGCCGGTCACCGTACTCACGAAGGCTATCTGATTTCTCTACATCAGATTTTAGTTTGTCCCTTGATGCATCTCATCCAAATTACAGGCTTGAAAAGCTTGCTTTCAAAGATCAAGCAAGTTCCTTTTGGAGACTAGTAAAAATGAACTCTCCTGAATGGCTTTACGCTTTAATCGGCTCAATAGGCTCAGTTGTTTGCGGATCACTTAGTGCTTTCTTTGCCTATGTTCTCAGTGCTGTCCTCAGTGTCTATTACAATCCAGACCACAAACACATGATCCGAGAAATTGATAAGTACTGCTACTTGTTGATTGGCCTTTCATCAACTGCATTTATTTTCAATACATTACAACACTTCTTCTGGGATATTGTTGGCGAAAATCTTACGAAACGTGTCAGGGAGAAAATGCTGACTGCAGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTTCTGCAAGGCTGGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGACCGAATTTCGGTAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGCACTGCAGGTTTCGTGTTGCAGTGGCGTCTTGCGCTTGTCCTCATTGCTGTTTTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGATTTGGAAGCTGCTCATGCCAAAGCCACACAACTAGCTGGAGAGGCAATAGCCAATGTAAGGACTGTTGCAGCCTTCAATTCAGAATCAAAAATTGTTCGCCTTTTCGCCTACAACCTTGAAACACCACTACAAAGGTCCTAA 2958 0.4229 MSKESEEIKTIEQWKWSEMQGLELVGRDDDVDNTHNNSESFKGNLPTVTEEGATATVIDSQQHQVSKEMVETSEPNKDGGIEEKKIKTESVPSVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPIFLRFFADLVNSFGSNANNLDKMTHEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSSKSQEALSQAGNIVEQTVLQIRVVLSFVGESRALQGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPNIDRNSESGLELETVTGLVELKNVNFSYPSRPEVLILNDFSLNVPAGKTMALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGFETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEIAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKDQASSFWRLVKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTAFIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFAYNLETPLQRS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02507 985 CDD ABC_6TM_Pgp_ABCB1_D2_like 757 985 - -
Car03g02507 985 SMART AAA_5 462 648 IPR003593 -
Car03g02507 985 CDD ABC_MTABC3_MDL1_MDL2 435 674 - -
Car03g02507 985 Gene3D ABC transporter type 1, transmembrane domain 98 686 IPR036640 GO:0005524|GO:0016021
Car03g02507 985 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 111 984 IPR039421 -
Car03g02507 985 Pfam ABC transporter transmembrane region 111 384 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02507 985 Pfam ABC transporter transmembrane region 768 983 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02507 985 ProSitePatterns ABC transporters family signature. 574 588 IPR017871 GO:0005524
Car03g02507 985 Gene3D ABC transporter type 1, transmembrane domain 744 985 IPR036640 GO:0005524|GO:0016021
Car03g02507 985 SUPERFAMILY ABC transporter transmembrane region 754 982 IPR036640 GO:0005524|GO:0016021
Car03g02507 985 Gene3D - 425 675 IPR027417 -
Car03g02507 985 CDD ABC_6TM_Pgp_ABCB1_D1_like 111 408 - -
Car03g02507 985 MobiDBLite consensus disorder prediction 26 46 - -
Car03g02507 985 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 435 671 IPR003439 GO:0005524
Car03g02507 985 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 111 984 - -
Car03g02507 985 Pfam ABC transporter 453 602 IPR003439 GO:0005524
Car03g02507 985 SUPERFAMILY ABC transporter transmembrane region 99 419 IPR036640 GO:0005524|GO:0016021
Car03g02507 985 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 767 985 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g02507 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 426 674 IPR027417 -
Car03g02507 985 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 113 400 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02507 Car-Chr3 70977385 70983371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02507 76 984 Calmodulin-binding Proteins AT2G36910 88.030 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02507 K05658 - gmx:100814667 1651.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02507 03 70977385 70983371 Car03g02507 03 70977385 70983371 ECH