Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02504 ATGATGTATATAATCATAAAAAAAATGTGTTCATCATTCAACCAAACTACCACATATCTTTGTTTTGTAACCTTTAGGAAGAATTGTAATTTTAAGATGAAGTACGAAGTCATGGTTATAAGTGTTTTGTTGGCGGTGATTATGGGTTCTGTGCAAGCAATCCCAAGAAGAAGATTCCGCGAAAAAACAAATGTTGTTATTGAAAATGATTTGCCACGTGATAATACACTCGCCGTGCATTGCAAATCAGGTAATGATGATTTAGGGGTAACAACTCTTGTAAATGGTAGTCAACTAAAATTTTCCTTCAGACCTAATATTTTTGGAACAACTTTGTTTTGGTGTAATTTTAAATGGAAGAATGTTGATAAGACCGTCGACATTTACAGTGCTAAGCATGATAGATCAGAGTGTATTAGATACTGTCAACGAAGTGTTAGAGTAGATGGAATTTATTATTTTAATGAGGTTGATATTAAGTGGTATAAAAAATATTCATGGTAA 504 0.3214 MMYIIIKKMCSSFNQTTTYLCFVTFRKNCNFKMKYEVMVISVLLAVIMGSVQAIPRRRFREKTNVVIENDLPRDNTLAVHCKSGNDDLGVTTLVNGSQLKFSFRPNIFGTTLFWCNFKWKNVDKTVDIYSAKHDRSECIRYCQRSVRVDGIYYFNEVDIKWYKKYSW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02504 167 Pfam Plant self-incompatibility protein S1 64 167 IPR010264 -
Car03g02504 167 PANTHER - 58 161 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02504 Car-Chr3 70922202 70922731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02504 38 156 Carbohydrate Esterase AT3G16970 37.097 9.54e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02504 - - cam:101499445 123.25